Gene Rmet_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2121 
Symbol 
ID4038929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2302608 
End bp2303420 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content66% 
IMG OID637977507 
ProductABC transporter-related protein 
Protein accessionYP_584269 
Protein GI94311059 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0515525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0482429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CTGCACTTTC CCTCGAAAAC GTGACCTGTA CCTTCGTCTC GCGCGAAGAC 
CGCGCGCAGC GCTATACCGC TGTGCGCGAC GTCACGCTAT CCATCCAGCC CGGCGAGTTT
GTCTCTGTCG TGGGCCCCAC CGGCTGCGGC AAATCAACGC TGCTGAATGT ATCGGCCGGC
CTGCTCGAAC CCTCGACCGG GACCGTGCGC GTCTTTGGCG AGCCGCTCAA GGGCATCAAT
GCGCGTGCCG GCTACATGTT CCAGGCCGAA GCGCTGATGC CGTGGCGCAG CGCGCTCGAC
AACGTGATCG CCGGCCTGGA GTTCCGCGGA GTGCCGCGCG ATGAAGCGGT GAAGCAGGGC
GAGGAATGGC TGCGGCGCGT GGGGCTGGGC GGGTTTGGTG ATCGCTATCC GCACCAGCTA
TCTGGCGGCA TGCGCAAGCG CGTGAGCCTG GCGCAGACGC TGGTGATGGA CCCGGACATC
ATCCTGATGG ACGAGCCGTT CTCGGCGCTG GACATCCAGA CGCGTCAGCT CATGGAGAAC
GAGGTGCTCG ACCTGTGGGC GGCCAAGCGC AAGGCCGTGC TGTTCATTAC GCACGACCTT
GACGAGGCCA TCGCGATGAG TGACCGCGTG GTGGTGCTGT CCGCTGGGCC GGGCACGCAC
CCGATCGGCG AGTTCTCCAT CGACCTGCCG CGGCCGCGCG ATGTGGCCGA GATCCGCAAC
CATCCGCGCT TCGTGGAACT GCACGCCGCC ATCTGGGACG TGCTGCGCGA AGAAGTGCTC
AAGGGCTACG CGCAGCAGCG CAAGGCGGCC TGA
 
Protein sequence
MSTPALSLEN VTCTFVSRED RAQRYTAVRD VTLSIQPGEF VSVVGPTGCG KSTLLNVSAG 
LLEPSTGTVR VFGEPLKGIN ARAGYMFQAE ALMPWRSALD NVIAGLEFRG VPRDEAVKQG
EEWLRRVGLG GFGDRYPHQL SGGMRKRVSL AQTLVMDPDI ILMDEPFSAL DIQTRQLMEN
EVLDLWAAKR KAVLFITHDL DEAIAMSDRV VVLSAGPGTH PIGEFSIDLP RPRDVAEIRN
HPRFVELHAA IWDVLREEVL KGYAQQRKAA