| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2104 |
|---|
| Symbol | |
|---|
| ID | 4038912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2285556 |
|---|
| End bp | 2286188 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637977490 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_584252 |
|---|
| Protein GI | 94311042 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2976] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.155283 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.073414 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTACG ATCTAGAAGA ACAGGAACAG CTTGAGAGTC TCAAGGCCTG GTGGAAACAG
TATGGCAACG CTGTCACCTG GGCGTTGATT GTCATCTTGC TCGGGTTGGC TGCCTGGAGT
GGTTGGGGTT ACTGGCAGCG CGTGCAGGCG CGCGATGCGT CGCTGCTGTA TGAGCAGGTC
ACCAAGGCTG CGGAAAGCCG CGACGCCGAC CGCGTGAAGC GCGCCGCTAC CGACCTCGAA
GAGAAGTTTG GTCGTACCGC CTATGGACCG ATGAGCGCGT TGGTCGCGGC CAAGGTGCTG
TACGAAGCCG GTGATCTGGC TGGCGCCAAG ACCCAGCTCC AGTGGGCAAT CGACCATGGC
GGTGACGACT ACGCGCCGCT GGCCCGTGTG CGCATGGCTG GCGTGCTGCT GGACGAGAAG
GCCTATGACC AGGGTCTGGC GCTGCTCAAG GACGAGCCGG CCGCACCTTA CGCTGCGCTG
TTCGCAGACC GTCGTGGCGA TCTGCTGGCC GCCCAGGACA AGCGCGAGGA AGCGCGTACC
GCCTATCGCA GCGCGCTCGA CAAGCTCGGC AGCGGTGAGG CGGCCATGCG CCAGATCATC
CAGTTCAAAC TCGATGCGCT GGGCGCGGCC TGA
|
|---|
| Protein sequence | MAYDLEEQEQ LESLKAWWKQ YGNAVTWALI VILLGLAAWS GWGYWQRVQA RDASLLYEQV
TKAAESRDAD RVKRAATDLE EKFGRTAYGP MSALVAAKVL YEAGDLAGAK TQLQWAIDHG
GDDYAPLARV RMAGVLLDEK AYDQGLALLK DEPAAPYAAL FADRRGDLLA AQDKREEART
AYRSALDKLG SGEAAMRQII QFKLDALGAA
|
|---|
| |