| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2047 |
|---|
| Symbol | |
|---|
| ID | 4038854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2215382 |
|---|
| End bp | 2216479 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637977432 |
|---|
| Product | AFG1-like ATPase |
|---|
| Protein accession | YP_584195 |
|---|
| Protein GI | 94310985 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1485] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0831727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCA CCGAGTTTTA CGAACACGAA CTCAAGCAGC GCGGCTATCA GTCAGATGAG
GCGCAGCGTC GCGCCGTGGA GCGGCTCCAG CAATGCTATG ACGAGTGGGT GGCCTACAAG
GGCCGTCGAA ACAGCACGCT GAAGAAGTTG CTGGTACACC CCGAGGTGCC GAAGGGCGTC
TACATGTGGG GTGGGGTGGG GCGCGGCAAG TCGTTCCTGA TGGACAGTTT CTATTCCTGC
GTGCCGGTGG TGCGCAAGAC GCGGCTCCAC TTCCACGAGT TCATGCGCGA GGTGCATCGG
GAACTCGAGG AACTGCGCGG TCGGGCAGAC CCGCTGGACG AACTGGCGAA ACGCATTGCG
CGCCGCTTCC GGTTGATCTG CTTCGACGAG TTCCACGTCA ATGATGTGGC GGATGCGATG
ATCCTGCATC GTCTGCTGCA GCAGTTGTTC GAGAACGGTG TGCAGTTCGT GATGACGTCG
AACTATCGCC CGGATCTGCT TTACCCGGAC GGCCTTCACC GTGATCGGGT GCTGCCGGCT
ATTGCGCTGC TGCAGCAAAA GCTCGATGTA CTCAATGTCG ATGCCGGCAT CGACTACCGC
AAGCGGGCGC TGGAACAGGT ACAGGCCTAC CATACGCCGC TGAACCGGGA AGCCAGCGCC
GCGCTGCGCG ATGCGTTCGT GTCCATCGCG GGTACGGCGG ACGAGTCTCC GATCCTGCAT
ATCGAACATC GCGAGATCAA GGCGTTGCGC AAGGCCAATG GCGTGGTCTG GTTCGATTTC
GCGACCTTGT GCGGCGGCCC GCGCTCCCAG AACGACTATC TGGAGATTGC GTCACAGTTT
CATACGGTGA TCCTGTCGGA TGTGCCGAAG ATGACGCCGC GGATGTCATC GGAGGCGCGC
CGCTTCACCT GGCTGATCGA TGTTTTCTAC GATCACAAGG TCAAGCTGCT GATGTCCGCC
GAGGTGCCGG CCGACGAACT CTATACCGAA GGCCAGATGG CGAACGAGTT TCATCGGACG
GTCTCGCGGA TCATCGAGAT GCAGTCGCGG GAGTACCTCG AGTCCGAACG TCGTACGGTC
GACACCTCGT TGACCTGA
|
|---|
| Protein sequence | MNVTEFYEHE LKQRGYQSDE AQRRAVERLQ QCYDEWVAYK GRRNSTLKKL LVHPEVPKGV
YMWGGVGRGK SFLMDSFYSC VPVVRKTRLH FHEFMREVHR ELEELRGRAD PLDELAKRIA
RRFRLICFDE FHVNDVADAM ILHRLLQQLF ENGVQFVMTS NYRPDLLYPD GLHRDRVLPA
IALLQQKLDV LNVDAGIDYR KRALEQVQAY HTPLNREASA ALRDAFVSIA GTADESPILH
IEHREIKALR KANGVVWFDF ATLCGGPRSQ NDYLEIASQF HTVILSDVPK MTPRMSSEAR
RFTWLIDVFY DHKVKLLMSA EVPADELYTE GQMANEFHRT VSRIIEMQSR EYLESERRTV
DTSLT
|
|---|
| |