Gene Rmet_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1940 
Symbol 
ID4038745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2108668 
End bp2109522 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content65% 
IMG OID637977323 
Producthypothetical protein 
Protein accessionYP_584088 
Protein GI94310878 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000335524 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.789392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTT GCGATGGCAG CGCACGGCAT TTGCGATCGC TCGGCCCGTC GCGCGGCGCT 
ACGCTGAATC CTCTCCCAAT CCCCGCCTCG CCGATGGACC TGTCCGCCCT GCTTCCCGAC
GTTTCCCTGC CCGCCTATGC CACCATGAGC GCCGCGTTGG CCGTGGCGTA CGTCATCTTC
GGCATCGCCG GATTCGGCAC GGCGCTGATG GCAGCACCTG TGCTGGCCTA TGTGATGCCC
GTCGCGCAGA TCGTGCCACT TCTGGCGTTA ATGGACTGCT CGGCGGCACT TCTAAACCTG
GCACGCGACG GACACGCCGC CGATCGTACC GAGTTGCGGC GGCTGGTGCC GTGCCTGCTC
ATTGGCAGCC TGATCGGCGC GGCACTGCTG CTGCGGATAC GCGCCGACCT GCTGCCCGCC
GTGCTGGGTG TCTTCGTCAC GGCGTATGCG ATCTGGTCGT TGCTCGGCAA GCGGCCGGCC
ACGCGACTTC CCTCATCCGC CGCCGTGCCG TTCGGGTTGG TCGGTGGCAT CTGCTCCGCA
ATGTTCGGTA GCGGTGGCTT TCTGTACGCG ATCTATCTGT CGAGCCGGCT CGACAAGGAC
GCCATGCGTG TCACCCAATC GACCTTGATT GGTTTGTCCA CGCTGACGCG GTTGGTGCTG
TTCCTGCTGG CGGGCGTTTA CGCGCGCGCG GAACTGCTGA AGCTTGCGGT GGCACTGGCG
CCGGCGATGA TCGCTGGGCT GTGGGCCGGG CGCCAGATTA CGCTGCGCAT GTCGCGCGAG
CAGTTCCTTC GCGTGGTGAA CGTGATCGTA TTGCTTTCAG GCAGCGCACT GGTCATTCGC
ACCTGGCTGG CCTGA
 
Protein sequence
MPICDGSARH LRSLGPSRGA TLNPLPIPAS PMDLSALLPD VSLPAYATMS AALAVAYVIF 
GIAGFGTALM AAPVLAYVMP VAQIVPLLAL MDCSAALLNL ARDGHAADRT ELRRLVPCLL
IGSLIGAALL LRIRADLLPA VLGVFVTAYA IWSLLGKRPA TRLPSSAAVP FGLVGGICSA
MFGSGGFLYA IYLSSRLDKD AMRVTQSTLI GLSTLTRLVL FLLAGVYARA ELLKLAVALA
PAMIAGLWAG RQITLRMSRE QFLRVVNVIV LLSGSALVIR TWLA