Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1940 |
Symbol | |
ID | 4038745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2108668 |
End bp | 2109522 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637977323 |
Product | hypothetical protein |
Protein accession | YP_584088 |
Protein GI | 94310878 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000335524 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.789392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATTT GCGATGGCAG CGCACGGCAT TTGCGATCGC TCGGCCCGTC GCGCGGCGCT ACGCTGAATC CTCTCCCAAT CCCCGCCTCG CCGATGGACC TGTCCGCCCT GCTTCCCGAC GTTTCCCTGC CCGCCTATGC CACCATGAGC GCCGCGTTGG CCGTGGCGTA CGTCATCTTC GGCATCGCCG GATTCGGCAC GGCGCTGATG GCAGCACCTG TGCTGGCCTA TGTGATGCCC GTCGCGCAGA TCGTGCCACT TCTGGCGTTA ATGGACTGCT CGGCGGCACT TCTAAACCTG GCACGCGACG GACACGCCGC CGATCGTACC GAGTTGCGGC GGCTGGTGCC GTGCCTGCTC ATTGGCAGCC TGATCGGCGC GGCACTGCTG CTGCGGATAC GCGCCGACCT GCTGCCCGCC GTGCTGGGTG TCTTCGTCAC GGCGTATGCG ATCTGGTCGT TGCTCGGCAA GCGGCCGGCC ACGCGACTTC CCTCATCCGC CGCCGTGCCG TTCGGGTTGG TCGGTGGCAT CTGCTCCGCA ATGTTCGGTA GCGGTGGCTT TCTGTACGCG ATCTATCTGT CGAGCCGGCT CGACAAGGAC GCCATGCGTG TCACCCAATC GACCTTGATT GGTTTGTCCA CGCTGACGCG GTTGGTGCTG TTCCTGCTGG CGGGCGTTTA CGCGCGCGCG GAACTGCTGA AGCTTGCGGT GGCACTGGCG CCGGCGATGA TCGCTGGGCT GTGGGCCGGG CGCCAGATTA CGCTGCGCAT GTCGCGCGAG CAGTTCCTTC GCGTGGTGAA CGTGATCGTA TTGCTTTCAG GCAGCGCACT GGTCATTCGC ACCTGGCTGG CCTGA
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Protein sequence | MPICDGSARH LRSLGPSRGA TLNPLPIPAS PMDLSALLPD VSLPAYATMS AALAVAYVIF GIAGFGTALM AAPVLAYVMP VAQIVPLLAL MDCSAALLNL ARDGHAADRT ELRRLVPCLL IGSLIGAALL LRIRADLLPA VLGVFVTAYA IWSLLGKRPA TRLPSSAAVP FGLVGGICSA MFGSGGFLYA IYLSSRLDKD AMRVTQSTLI GLSTLTRLVL FLLAGVYARA ELLKLAVALA PAMIAGLWAG RQITLRMSRE QFLRVVNVIV LLSGSALVIR TWLA
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