| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1935 |
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| Symbol | |
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| ID | 4038740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2103900 |
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| End bp | 2104979 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977318 |
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| Product | oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein |
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| Protein accession | YP_584083 |
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| Protein GI | 94310873 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase
[COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0299826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.80654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAAA CGCATGCCCC CCTGCCTACC GCCCCCACAG ATGTCGGCGG CCGGGCGCAG
CCACTGCTCA TCGCGCGCCA GTTGGTCAAG CACTTTCCGT TGAAGTCCCC GGTCCCGCTG
CGCAAGGGCG GTGTCGTGCG TGCCGTGGAC GGCGTGAGCT TCGACGTCCT CAAGGGCGAA
ACACTTGGCG TCGTCGGGGA ATCTGGCTGC GGCAAGTCCA CCACGGCACG CCTGCTGATG
CAACTCACGC CGCAGGACAG CGGCGAACTG ATCTTCGATG CACAGGGCGT CGACTCCCGG
CAATTGCCGA TGAAGGCGTT CCGCAGTCAG GTGCAGATGG TATTCCAGGA CAGCTACTCG
TCGCTCAACC CACGACTGAC TATCGAGGAA TCGATCGCGT TCACGCCACG TGTCCACGGC
GTTTCCGCAC GGGAAGCCAC GGAACGCGCC CGCTACCTGC TGGAGCGCGT GGGGCTGGAG
CCGAAGCGAT TCGCCGGCCG CTATCCGCAC GAACTGTCGG GCGGACAGCG CCAGCGCGTG
AACATTGCGC GCGCGCTGGC GCCACGGCCC CGCCTTGTCA TTCTTGACGA AGCCGTGTCC
GCCCTCGACA AGTCCGTGGA AGCCCAGGTA CTGAACCTGC TGATGGACCT CAAGGCCGAA
TTCAACCTGA CCTACGTATT CATCAGTCAC GACCTCAATG TGATTCGCTA CCTTTGCGAC
CGCGTCATGG TCATGTATCT GGGCAAGGTC GTGGAGATCG GCGCAACCGA ATCCGTCTAT
GCCAACCCGG CCCATCCCTA TACGCGGGCG CTGCTGACAT CGATGCCTTC GATGGACCCC
GACCAGCGCA CGCTGGCCGC GCCGTTGGCC GGCGATCCGC CCAACCCGAT CAATCCGCCA
TCGGGCTGCA GCTTCCATCC GCGCTGCGTG CGTGCCGAGC CCATTTGCGA GCGGCGCGAG
CCTGTGCTCA CCGACGCGCT CGCCGGCCAT CCAGTGTCAT GCCTGATGGC CATGCCAGAC
GGCGGCCACT CGCTGCCGCT GCGCCGGCTG ACGACGAACC TGCATGCCGC CACGCCCTGA
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| Protein sequence | MVETHAPLPT APTDVGGRAQ PLLIARQLVK HFPLKSPVPL RKGGVVRAVD GVSFDVLKGE
TLGVVGESGC GKSTTARLLM QLTPQDSGEL IFDAQGVDSR QLPMKAFRSQ VQMVFQDSYS
SLNPRLTIEE SIAFTPRVHG VSAREATERA RYLLERVGLE PKRFAGRYPH ELSGGQRQRV
NIARALAPRP RLVILDEAVS ALDKSVEAQV LNLLMDLKAE FNLTYVFISH DLNVIRYLCD
RVMVMYLGKV VEIGATESVY ANPAHPYTRA LLTSMPSMDP DQRTLAAPLA GDPPNPINPP
SGCSFHPRCV RAEPICERRE PVLTDALAGH PVSCLMAMPD GGHSLPLRRL TTNLHAATP
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