| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1924 |
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| Symbol | |
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| ID | 4038728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2091301 |
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| End bp | 2092017 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637977306 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_584072 |
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| Protein GI | 94310862 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.588945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAGC GGCGAACAGC TCTTGTAACT GGCGCAACGA AGGGGATTGG ACTGGCCTTG
AGCAAGCATT TGCAGCAACT TGGCTGGAGC GTTATCGGCG TTGCCCGCCA TGCAATTGAG
GGCTTTCCCG GTCAGCTTCT TACAGCTGAT TTGGCGGACA TCCAGCAAAC CGACGCAGTA
CTGGCCCAAG TCGTGGCGGC ATCAAGGATT GATGCGGTGA TCAATAACGC TGGCATCGCC
CTTCCGCAAA AACTGGAATC TCTCGACCTG CCATCTCTCC AAACGGTATT CGACTTGAAT
GTGCGCGCTG CAGTTCAAGT TACACAGGCT TGCCTTCCCT CATTGAAACA GTCGCCAGCA
GGACGCATCG TGAACGTTTG CAGTCGCGCG ATTCACGGCG CACGCGATAG AACGTCATAT
GCTGCCGCAA AGAGCGCGCT GATTGGGGTC ACCCGTACTT GGGCCCTCGA ACTCGCACCG
CTCGGCATTA CCGCCAACGC CGTTGCTCCG GGCCCGGTTG AAACGGAGCT CTTCCGTTTG
ACGCACCCCG TCGGTAGCGA CGAGGAGAAA AGGATTCTCG CTACGATTCC CATGCAGCGA
CTGGGCAAGC CGGAGGAAGT AGCGTCCTTG ATCTCGTACC TCATCTCGGA CGGGGCCTCC
TTCGTTACTG GCCAGGTGAT CGGCATAGAC GGTGGCGGAA GCTTAGGGGG ACGCTAA
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| Protein sequence | MAERRTALVT GATKGIGLAL SKHLQQLGWS VIGVARHAIE GFPGQLLTAD LADIQQTDAV
LAQVVAASRI DAVINNAGIA LPQKLESLDL PSLQTVFDLN VRAAVQVTQA CLPSLKQSPA
GRIVNVCSRA IHGARDRTSY AAAKSALIGV TRTWALELAP LGITANAVAP GPVETELFRL
THPVGSDEEK RILATIPMQR LGKPEEVASL ISYLISDGAS FVTGQVIGID GGGSLGGR
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