Gene Rmet_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1845 
Symbol 
ID4038647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1999068 
End bp1999988 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content65% 
IMG OID637977225 
Productalpha/beta hydrolase fold 
Protein accessionYP_583993 
Protein GI94310783 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.12367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC CCGCCGTGAT CCACCACAGG CAGTTTGCGA ACCTGCCCAA CGGCACGCGC 
TTGCATTACG CGAGTGCGGG CGAGCAGGGC AGGCCGCTGA TCCTGTTCGT GCACGGCTTT
CCGGAGTTCT GGTACGAGTG GGAAAACCAG CTCGCAGAGT TCGGCCAGAC GCATTTTGCG
GTCGCGCCGG ACCTGCGCGG GTTCAATCTG TCCAGCAAGC CGGCCGATGT GGCAGCGTAC
AAGCCCAAGC ATCTGGTCGA GGATCTGGTG CAGTTCATCC GCGTGCTGGG CTATGAGCGG
TGCGTCATCG TCGCGCATGA CTGGGGCGGC GCGCTCTGCT GGAACCTGGC GGCGCAGTTC
CCGGAAGCGG TCGAGCGGCT CGTGATCATC AACTCGCCGC ATCCCTATGT GTTCGCGCGG
GCGTTGGCGA GTGACCCGGC ACAGCAGCAG GCCTCGGCCT ATATGAACTG GCTGCGCAAG
CCGGGTTCAG AACAGGCCAT GGCCGCCAAC GACTTCGCAT TGCTGGAAAA GATGCTGACC
GGCGATGCCT CCACGGTGCC GGCGTGGTTC GTGGGTGAGA CTCGCGCGAA GTATCACGCG
GCGTGGTCAC AACCGGGCGA TGGCGGCTCG CATTCGCTGA CGGGCGGTGT CAATTACTAC
CGGGCATCGC CGATGCACCC GCCCTTGCCG GGAGAACCGG CGCCCGACAT CTCGCGCCTC
GATCCATCCG CGTACATCGT GCGGGTGCCC ACGCTGGTTA TCTGGGGCGA GAGCGACCGG
GCGCTGCCGA AATCGCTAGT CGACGGGCTG GAGGAATTCG TGCCAGACAT GCGGCTCGAG
CGCATTCCGG AGGGCACGCA CTGGATCATC CACGAACAGC CGGAGCGCGT GAACCTGCTG
ATCCGCAGTG CGTTGCCCTA G
 
Protein sequence
MTAPAVIHHR QFANLPNGTR LHYASAGEQG RPLILFVHGF PEFWYEWENQ LAEFGQTHFA 
VAPDLRGFNL SSKPADVAAY KPKHLVEDLV QFIRVLGYER CVIVAHDWGG ALCWNLAAQF
PEAVERLVII NSPHPYVFAR ALASDPAQQQ ASAYMNWLRK PGSEQAMAAN DFALLEKMLT
GDASTVPAWF VGETRAKYHA AWSQPGDGGS HSLTGGVNYY RASPMHPPLP GEPAPDISRL
DPSAYIVRVP TLVIWGESDR ALPKSLVDGL EEFVPDMRLE RIPEGTHWII HEQPERVNLL
IRSALP