| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1839 |
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| Symbol | |
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| ID | 4038641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1993824 |
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| End bp | 1994606 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977219 |
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| Product | xylose isomerase-like TIM barrel |
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| Protein accession | YP_583987 |
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| Protein GI | 94310777 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0157456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.118454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCGCT TCGCCGCGAA CCTTTCAATG ATGTACACGG AGCACGACTT TCTGGACCGC
TTTGCCGCCG CCGCAAAGGA CGGGTTCCAG GCCGTGGAGT ACCTGTTCCC GTACGACCAT
CCGGCCGCCG AGATCCGCAA GCGGCTCGAC GACAACGGCC TGACCCAGGC CCTGTTCAAC
GCGCCGCCCG GTGACTGGGG CGCGGGCGAG CGTGGCATCG CCGCCCTGCC CGGCCGCGAG
ACCGAGTTCC GCACTGAGTT CGCGAAGGCC CTCGAATACG CTGCCGTGCT CGGCAACGAC
CGCGTGCACG TGATGGCAGG CATCGTGCCG GCCGACGCCG ACCACGCCCG CTGCCGCTCC
ATCTATCTCG AGAACCTGGC CTATGCCTCT GCCTCGGCCG CGTCGCATGG CATCACGGTG
CTGATCGAGC CGATCAACAC CCGCGACATG CCGGGCTATT TCCTGAACCG CCAGGACGAA
GGCCAGACCA TTTGCCGCCA GGTGGGCGCG GCCAATCTCA AGGTCCAGTT CGATTGCTAT
CACTGCCAGA TCGTCGAGGG TGATATCGCG AAGAAACTCG AACGCGACTT CGCTGGGATT
GGCCATATCC AGATCGCCGG CGTGCCCGAA CGCCACGAAC CCGATATCGG CGAACTGAAC
TACCCGTACC TCTTCGACGT CATCGACCGG CTCGGATACA CGGGCTGGAT CGGCTGCGAA
TACCGCCCGC GTGGCGGCAC GTCGGAAGGT CTGGGCTGGA TCAAGCCCTG GCTGAAGCGC
TGA
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| Protein sequence | MPRFAANLSM MYTEHDFLDR FAAAAKDGFQ AVEYLFPYDH PAAEIRKRLD DNGLTQALFN
APPGDWGAGE RGIAALPGRE TEFRTEFAKA LEYAAVLGND RVHVMAGIVP ADADHARCRS
IYLENLAYAS ASAASHGITV LIEPINTRDM PGYFLNRQDE GQTICRQVGA ANLKVQFDCY
HCQIVEGDIA KKLERDFAGI GHIQIAGVPE RHEPDIGELN YPYLFDVIDR LGYTGWIGCE
YRPRGGTSEG LGWIKPWLKR
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