Gene Rmet_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1769 
Symbol 
ID4038571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1920924 
End bp1921916 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content66% 
IMG OID637977149 
Producthypothetical protein 
Protein accessionYP_583917 
Protein GI94310707 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.416782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.417571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA AGTTTCATTC CGGCCGCCTG ACTTGGCTGC TTGGCACCGC GTTCAGCGGC 
CTCATGATCG TTGCCGCGCC AGCATCCGCC GCGGACGATG CGCCGATGCA CATCATCGTT
GGCTACGCGC CGGGCGGTGC CGCCGACAGT CTGGCCCGGA TCTACGCCGA GCAACTCCGT
CAGGACGGGC AGGGCACGGT GATCGTGGAG AACCGCCCGG GCGCATCTGC ACGGCTGGCG
CTCGACTACG TCAAGCGGTC GAAGCCCGAT GGCAAGACGA TCTTCATCGG CCCGTCGCCA
CTGTTCACGA TCTTCCCGCT CACGTACAAG AAGCTCAGCT ACGACGCCGA CAAGGACCTC
GTGCCCGTGG CGGTGCTAAC TGACGTGCCG ACCGCCGTGG CAGCAGGCGT GCAGCAGCCG
TACAAGAACA TGAAGGAATT CCTGGACTGG GCCAAGCAGC ATCCGTCCAA GGCCAGTCTG
GGCCTGGCCA CGATCGGCAG TGCGGGCCAC CTTGGCACGG TGGCGCTGGG CAAGGCATCG
GGCGTGGCCA TCACGCCCAC GCCATACCGT GGCGCATCGC CGATGCTGGT GGACGTGATC
AGCGGCAACG TGTCGATCGG CTGGGATGCG GTGGCCAGCA TGATGTCGCT GTACAAGGGC
GGCAAGATTC AGCTTCTGGG CGTGAGCGGC ACACGACGTG CCAAGGCGTT GCCGGAAGTG
CCGACGATGA AGGAGCAGGG CATCAACCAG TACGAATTCG CGACGAGCTG GTACGGCGCC
TTCGTGCCCG CTGGCACGCC CGCCGCAGAG CAGGCCAAGC TCGAAAAGGC GTTCCTCCAG
GCATCGACCA ATGCGTCGAG CGCGGCCAAG CTGGAGACGC TGGGGCTTGA GGTGAACGCC
CAATCCGGCG AGGCCGCGCG CAAGCGCATC CAGACAGAAC GCGCGGCATG GAAGCCGATC
GTCGAGTCGA CCGGGTTCGT GGCAGAGGAC TGA
 
Protein sequence
MTVKFHSGRL TWLLGTAFSG LMIVAAPASA ADDAPMHIIV GYAPGGAADS LARIYAEQLR 
QDGQGTVIVE NRPGASARLA LDYVKRSKPD GKTIFIGPSP LFTIFPLTYK KLSYDADKDL
VPVAVLTDVP TAVAAGVQQP YKNMKEFLDW AKQHPSKASL GLATIGSAGH LGTVALGKAS
GVAITPTPYR GASPMLVDVI SGNVSIGWDA VASMMSLYKG GKIQLLGVSG TRRAKALPEV
PTMKEQGINQ YEFATSWYGA FVPAGTPAAE QAKLEKAFLQ ASTNASSAAK LETLGLEVNA
QSGEAARKRI QTERAAWKPI VESTGFVAED