| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1663 |
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| Symbol | |
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| ID | 4038466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1797425 |
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| End bp | 1798252 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637977045 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_583813 |
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| Protein GI | 94310603 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.44583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCAA TAGGGCGCGA CGAACCGAAG ATTCGCGCAA CTCGAATCAA AAGAATCTGG
AATGATTGGC GATTTCCCTC CGGGTTCCAT GCACTTAGAT TCGTAATTAT CTTCGGTGTG
ATGATTATGC AGGCGTGGAA CCCGCAGGCA ATTGCTGGTG TGACACCAGA AGTCTCTCGG
GTTGTTTACG CAGCTGATGC TGCCGAGCAG TCTCTACAAG TATTTAATGT CAACGATTAT
CCAGTTCTTG CTCAGGCCTG GATCGACGAC GGCAGGATAG ACGCCCTACC ACAAGAATCA
ACCGCGCCGA TAGTTGTGAT TCCGCCAATC TTTCGCTTAG GCCGCGGTGA TCAGACAAGT
CTCCGATTAA TAAACTCTGG AGCCGCGCTT CCGTCAGATC GTGAGTCATT ATTTTGGCTC
AACATTTATG AGATACCTTC AACGCCAAAT GGCAGCATGG CAGAGAGCCA GTTGGTTACG
GTAACGATGC GAACGCAGAT CAAAGTTTTC GTTCGACCCC GTAAGCTTCC CTTTTCATCG
GACGAGATCC CAAAGCGCCT TGCGTTCTCT GTCAAGATCA TGACTGATGA ATCTCTCTTG
GAGATTAGGA ATCCAACGCC ATATTATGTA ACATTTTCTA AAATTCAGAC CGATATCGGG
CGAATATCAC AAGTCTCATC TGTAGAAATG ATCGCGCCTT ACTCTCAGAC CATCGCCCAT
CTCGGCGAGG TAAAAGGCAT CGGTAATTCT GCAAGGATCC GATTCTCTCT AATCGATGAT
GATGGAAATC CATTTTATGG AGAACGAAAT ATTGATATTG AAAATTAG
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| Protein sequence | MSPIGRDEPK IRATRIKRIW NDWRFPSGFH ALRFVIIFGV MIMQAWNPQA IAGVTPEVSR
VVYAADAAEQ SLQVFNVNDY PVLAQAWIDD GRIDALPQES TAPIVVIPPI FRLGRGDQTS
LRLINSGAAL PSDRESLFWL NIYEIPSTPN GSMAESQLVT VTMRTQIKVF VRPRKLPFSS
DEIPKRLAFS VKIMTDESLL EIRNPTPYYV TFSKIQTDIG RISQVSSVEM IAPYSQTIAH
LGEVKGIGNS ARIRFSLIDD DGNPFYGERN IDIEN
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