| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1537 |
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| Symbol | |
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| ID | 4038340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1656930 |
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| End bp | 1659287 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637976921 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_583689 |
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| Protein GI | 94310479 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0523392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0813171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATGC CGCGAACCCA GCGCCAGCCC CGGCCCGTCC GCATCCGCAT CCGCGTGCGC
GGCGTGGTGC AGGGCGTGGG CTTCCGGCCC TTCGTTTATC GCCTGGCGCA GGAACTGGGC
GTCGCCGGCT GGGTGCGCAA CGACGGCGCC GGCGTGGACA TCGAGGTCCA GGGGAGCGCC
GCGGCCATCG CCGAGCTGCG CGAGCGGCTG CGCCGCGACG CGCCGCCCCT GGCGCGAGTG
GATGAGATCG GCGAGGAACG CTGCGCGGTA CAAGCCGACG CCGACGGCTT TGCCATCCTC
GAGAGCAACC GTTCCGATGC CGCCGTGCAC ACCGCCATCG GCCACGACAC GGCGGTGTGC
GCCGACTGCC TGGCGGAGCT TTTCGACCCC GCGGACCGGC GCTACCGTTA CGCCTTCATC
AACTGCACCC AGTGCGGCCC GCGCTACACG CTGACGCGCG CGCTGCCCTA CGACCGCGCC
ACCACCAGCA TGGCGCCGTT CCCGCAGTGC CCGCCCTGTC TGGGCGAGTA CCAAGCGCCG
GAGCATCGCC GCTTCCACGC CGAGCCCAAC GCCTGTCCGG ATTGCGGCCC CAGCTTGATG
CTGCTCGATG CGCAGGGCAT GCCGGTGCCG GGCGTAGACC CGATTGCCGG AACGGTGGCG
CGCGTGCTGC GCGGCGAGAT CGTCGCCATC AAGGGCCTGG GCGGCTTCCA TCTCGCCTGT
GACGCGCGTA ATGCCGAGGC GGTGGCGCGG CTGCGCGACC GCAAGCAGCG CGAGGAGAAG
CCCTTCGCGG TGATGGTCGC CAACCCGGTG ACGGCGGCGC AGTGGGGCGA TGTCTGCAGC
GGCGCAGAGA TCCTGCTCGC GGCGCCGGAG CGCCCCATCG TGCTGCTGCG CAAGCAGCGC
ATCGTCGACG AGCAGCTGCA CGGCGTGGCG CCGGGACTCG CCTGGCTGGG CGTGATGTTG
CCCCATACGC CGCTGCAGTA CCTGCTGTTC CACGAGGCGG CCGGCCGGCC CGACGGGCTC
GCCTGGCTCA CGCAGCCGCA GCCGCTGGTG CTGGTGATGA CCAGCGCCAA CCCCGGCGGC
GAGCCGCTGG TCATCCGAAA CCATGTGGCG CTGCAACGCC TCGCCGGCAT CGCCGATGCC
TTCCTCCTTC ACGACCGCGA GATCCTGGTG CGCTGTGATG ATTCTGTGGT GAGAGCCGAA
CCCACCGATC ACCCATCGCA GCAATTCATT CGTCGTGCTC GGGGTTACAT ACCGCGTGCC
ATCAAGCTCG CCCGCAGCGG TCCGTCGGTG CTGGCGCTGG GCGGCTACTT CAAGAACACC
GTGTGCCTGA CCCGCGGTGA CGAAGCCTTC GTTTCCCAGC ATGTGGGCGA TCTCGACAAC
GCCGCCACCT GTGAGGCGAT GATCGAGGCG GTGGCCCATC TGCGGCAGGT GCTGGACATC
CAGCCGCGGC TCGTCGCCCA CGACCTGCAT CCGGAATTCT TCAGCACGCG CCACGGGGCG
GAACTGGCGG CGGAATGGGC CGTGCCCGCC GTCGCCGTGC AGCACCATCA CGCCCACATC
GCTGCGGTGC TGGCCGAGCA CCGCTCGGAC GGGCCCGCCA TCGGCTTGGC GCTGGACGGC
GTCGGCCTGG GCAATGATGG CCAAGCGTGG GGTGGCGAAC TGCTGCTGGT GGACGGCGGC
TCCTGCAAAC GCCTCGGTCA CTTGCGCCGG CTGCCGCTGC CCGGCGGCGA CCGCGCGGCG
CGCGAGCCTT GGCGCATGGC TGCCGCCGCG CTGCACCTGA TGGGGCGTGG CGAGGAGATC
GCAGAGCGCT TTCCGCAGCA GCCGGGGGCG AAGATGGTGA ACCGCATGCT GGCCCAGCGG
TTGAACGCGC CGCTCACTTC CAGCATGGGC CGCTGGTTCG ACGCCGCCGC CGGCCTGCTG
GGCACGCGCG AGACCATGGC CTACGAGGGC CAGGCGGCGA TGCTGCTGGA AGGGCTGGCC
GAGCGCTGGG GCGAGGGGCT GGCGCTGCGC GATGCCTGGC GCATCGGCGC GGACAACGTC
CTGGATCTGC TGCCGCTGCT GGAGGCGCTG TCCGCCGAAG CAAACCCGGC GCGCGGTGCG
GCGCAATTCC ATGCTACGCT GGTGGCGGCG CTGGAAGCTT GGGCCGTCGC GGCGGTCCAG
GACACCGGCG TGCGCACCGT CGCCTTCGGC GGCGGCTGCT TCCTCAACCA CATCCTCGTC
CGCAACCTGG GTCGACGCCT GGCGGCACGC GGCCTGACCG TGCTGACGGC GCAGCAGCTG
CCGTCCAATG ACGGCGGCAT CGCCCTCGGT CAGGCCTGGG TGGCGCTGCG GTGGGCGCCT
CAACTTATGG AAGAGTAG
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| Protein sequence | MLMPRTQRQP RPVRIRIRVR GVVQGVGFRP FVYRLAQELG VAGWVRNDGA GVDIEVQGSA
AAIAELRERL RRDAPPLARV DEIGEERCAV QADADGFAIL ESNRSDAAVH TAIGHDTAVC
ADCLAELFDP ADRRYRYAFI NCTQCGPRYT LTRALPYDRA TTSMAPFPQC PPCLGEYQAP
EHRRFHAEPN ACPDCGPSLM LLDAQGMPVP GVDPIAGTVA RVLRGEIVAI KGLGGFHLAC
DARNAEAVAR LRDRKQREEK PFAVMVANPV TAAQWGDVCS GAEILLAAPE RPIVLLRKQR
IVDEQLHGVA PGLAWLGVML PHTPLQYLLF HEAAGRPDGL AWLTQPQPLV LVMTSANPGG
EPLVIRNHVA LQRLAGIADA FLLHDREILV RCDDSVVRAE PTDHPSQQFI RRARGYIPRA
IKLARSGPSV LALGGYFKNT VCLTRGDEAF VSQHVGDLDN AATCEAMIEA VAHLRQVLDI
QPRLVAHDLH PEFFSTRHGA ELAAEWAVPA VAVQHHHAHI AAVLAEHRSD GPAIGLALDG
VGLGNDGQAW GGELLLVDGG SCKRLGHLRR LPLPGGDRAA REPWRMAAAA LHLMGRGEEI
AERFPQQPGA KMVNRMLAQR LNAPLTSSMG RWFDAAAGLL GTRETMAYEG QAAMLLEGLA
ERWGEGLALR DAWRIGADNV LDLLPLLEAL SAEANPARGA AQFHATLVAA LEAWAVAAVQ
DTGVRTVAFG GGCFLNHILV RNLGRRLAAR GLTVLTAQQL PSNDGGIALG QAWVALRWAP
QLMEE
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