Gene Rmet_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1500 
Symbol 
ID4038303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1620012 
End bp1620368 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content58% 
IMG OID637976884 
Productribulose 1,5-bisphosphate carboxylase small subunit 
Protein accessionYP_583652 
Protein GI94310442 
COG category[C] Energy production and conversion 
COG ID[COG4451] Ribulose bisphosphate carboxylase small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000149089 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0217112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACG TAATGGATTA CAACTCCCGC CTTTCCGACC CCGCCAGCCG GAAGTTCGAA 
ACTTTTTCCT ACCTGCCCGC GATGGACGCG GCCAGCATCA AGAGGCAGGT CGAGTATCTG
GTGAAGAAGG GCTGGAACCC GGCTATCGAG CATATCGAGC CTGAGTACCT GATGGACTCC
TACTGGTACA TGTGGAAGTT GCCGATGTTC GGTGAAACCG ACGTCGATCG CGTTCTGGCC
GAGGCCAAAG CCTGCCACAA GGCCAACCCC AACAACCACG TGCGCCTGGT CGGCTACGAC
AACTTCAAGC AGTCGCAAGG CGCGGCCATG GTGGTTTACC GCGGCAAGAC GGTTTAA
 
Protein sequence
MSDVMDYNSR LSDPASRKFE TFSYLPAMDA ASIKRQVEYL VKKGWNPAIE HIEPEYLMDS 
YWYMWKLPMF GETDVDRVLA EAKACHKANP NNHVRLVGYD NFKQSQGAAM VVYRGKTV