| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1390 |
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| Symbol | |
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| ID | 4038193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1499337 |
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| End bp | 1500920 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976774 |
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| Product | malate synthase |
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| Protein accession | YP_583542 |
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| Protein GI | 94310332 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.153679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.601986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCA CGCTGCCCGC GGGCATGAAG ATTACCGGCG AGATTCTGCC GGCTTATGAA
GACATCCTGA CGCCGGAAGC CCTGGCCCTG GTCGACAAGC TGCACCGTGC CTTCGAGGCC
CGCCGTCAGG AACTGCTGGC CGCGCGCGTG GCGCGCACCA AGCGCCTCGA CGCCGGCGAA
CTGCCCGACT TCCTGCCGGA AACCAAGAGC ATCCGCGAAG GCGACTGGAA GGTTGCGCCG
GTGCCGAAGG CGCTGGAATG CCGCCGCGTG GAAATCACCG GTCCGGTCGA AGCCAAGATG
GTGATCAACG CCTTCAACTC GGGCGCTGAC AGCTACATGA CCGACTTCGA GGACTCCAAC
ACCCCGAACT GGCACAACCA GATGCAGGGT CAGGTGAACC TGAAGTCCGC CGTGCGCCGC
ACGCTGACGC TGGACAGCAA CGGAAAGCAC TACAAACTCA ACGACAAGAT CGCCACGCTG
CAGGTGCGTC CGCGCGGCTG GCACCTAGAC GAGAAGCACG TCACGATCGA CGGCAAGCGC
GTCTCGGGCG GCATCTTCGA CTTCGCGCTG TTCCTGTTCC ACAACGCCAA GGAGCAGATT
GCCCGCGGCG CCGGCCCGTT CTTCTATCTG CCGAAGATGG AAAGCCATCT GGAAGCGCGT
CTGTGGAACG ACATCTTCGT GATGGCGCAG AAGGAAGTCG GTCTGCCGCA AGGCACGGTC
AAGGCCACGG TGCTGATCGA GACGATCCTG GCCGCGTTCG AGATGGAAGA AATCCTGTAC
GAACTGCGCG AGCACAGCGC CGGCCTGAAC GCTGGCCGTT GGGACTACAT CTTCTCGTGC
ATCAAGAAGT TCAAGGTCGA CAAGAACTTC TGCCTTGCCG ACCGCGCCAA GGTGACGATG
ACCTCGCCGT TCATGCGCGC CTACGCGCTG CTGCTGCTGA AGACCTGCCA CAAGCGCGGC
GCGCCTGCGA TCGGCGGCAT GAGCGCGCTG ATCCCGATCA AGAACGATCC GGAGAAGAAC
GCTATCGCCA TGCAGGGCAT CATCGGCGAC AAGCGCCGTG ACGCCACCGA CGGCTACGAC
GGCGGCTGGG TGGCCCACCC GGGTCTGGTC GAGCCGGCAA TGAAGGAATT CGTGGACGTG
CTGGGCGACC GCCCGAACCA GTTCGACAAG CAACGTCCGG ACGTCGAAGT GAAGGGTGCC
GACCTGCTGA ACTTCCAGCC GGAAGCGCCG ATCACCGAAG CCGGCCTGCG CATGAACATC
AACGTCGGCA TCCACTACCT GGGCGCCTGG CTGGCTGGCA ATGGCTGCGT GCCGATCCAC
AACCTGATGG AAGACGCCGC CACCGCCGAG ATCTCGCGCT CCCAGGTGTG GCAGTGGATC
CGCTCGCCGA AGGGCAAGCT GGAAGACGGC CGCAAGGTGA CCGCCGAGAT GGTGCGCGCG
CTGATTCCGG AAGAACTGGC CAAGGTCCGC GAAGTGGTGG GCGCAGGCGC CACGTACGAC
CGTGCCGCGC AGATCTTCGA GCAGATGTCG ACTTCGGAAG ACTTTGCCGA ATTCCTGACG
CTGCCGCTGT ACGAAGAAGT CTGA
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| Protein sequence | MAITLPAGMK ITGEILPAYE DILTPEALAL VDKLHRAFEA RRQELLAARV ARTKRLDAGE
LPDFLPETKS IREGDWKVAP VPKALECRRV EITGPVEAKM VINAFNSGAD SYMTDFEDSN
TPNWHNQMQG QVNLKSAVRR TLTLDSNGKH YKLNDKIATL QVRPRGWHLD EKHVTIDGKR
VSGGIFDFAL FLFHNAKEQI ARGAGPFFYL PKMESHLEAR LWNDIFVMAQ KEVGLPQGTV
KATVLIETIL AAFEMEEILY ELREHSAGLN AGRWDYIFSC IKKFKVDKNF CLADRAKVTM
TSPFMRAYAL LLLKTCHKRG APAIGGMSAL IPIKNDPEKN AIAMQGIIGD KRRDATDGYD
GGWVAHPGLV EPAMKEFVDV LGDRPNQFDK QRPDVEVKGA DLLNFQPEAP ITEAGLRMNI
NVGIHYLGAW LAGNGCVPIH NLMEDAATAE ISRSQVWQWI RSPKGKLEDG RKVTAEMVRA
LIPEELAKVR EVVGAGATYD RAAQIFEQMS TSEDFAEFLT LPLYEEV
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