| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1380 |
|---|
| Symbol | |
|---|
| ID | 4038183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1489378 |
|---|
| End bp | 1490550 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637976764 |
|---|
| Product | histidine kinase internal region |
|---|
| Protein accession | YP_583532 |
|---|
| Protein GI | 94310322 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3275] Putative regulator of cell autolysis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.837243 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTAT CGTGCGCGGG CCCGTCGCGG CTCAATATTC TTTGGCGCGA CCTGCTGTTC
GTGCTCTGCA TGAACACGGT GATCGCCGTC AGCCTCAACT ACGGCTTCCG TACCGCCGGA
ACGCTGCTCC AGAATTTTGC CTACAGCCAG CTGATCGGTC TCTCGATCTG GGTGCTGATC
GATATCCCCC GCGTCCTGAT CTGGTGGAAC GATCGTCCGC GTCGATGGCC GTTCATGTGC
CTGGCCGTGG TGGCGGTGCC AATGGGCGTG GTGATGGGTA GCTGGGCGAC ACGCGAATTG
CTGGGGCTGC CGGAGAAGTC CGCGGCGGAG ACCGGCGACA TGCTGCGCAT GTGCCTGATC
GTCGGGATGC TGGCGTCGGC GAGCATGATC TACTTCTACT GGTCGCGCGA GAAGCTGGCG
TACCTGGAGC GGCAGGCCGC GCTCGACGCC TTGCAGCGCG AGGAAGCCGA AAAGCAACTC
GTGCGCGCCC AGTTGATGGC GCTGCAGGCA CAGATCGAGC CGCATTTCCT GTTCAACTCG
CTGGCCAATC TCGACGGCCT GATCGCCACC GACCCCCGCG CGGCGCGCCA GTTGCTGCAG
CGGCTGATCG GTTTCCTGCG CATGTCGTTG TCCCACACCC GCGCTGAGCA TTGCACGCTG
GCGCAGGAGT TCGAGTTGCT GCGCAGCTAC CTCGATATCC AGGGTATGCG ATTTGGCGCG
CGGCTCGATT ACGAGATCGA CCTGCCGCCA GCGCTGGCCG AGGCGGAGAT TCCGCCGATG
CTGGTGCAGC CGCTGGTCGA GAACGCGGTG ACTCACGGTA TCGAGCCGTG CATGCGCGGC
GGGAAGATCG TGCTGTCCGC GCGCGAGACT GGGGACGGCA GCCTGCAGGT GGTCATCGCC
GACACCGGCG TGGGATTCAG CCAGGGCAAT AAGGGCAGCA AGGGCGGTTC CGGGCTTGGC
CTGACCCATG TGCGCGAGCG CCTGGCACGG ATCTTCGGCG CAGCGGCCAC GATGCAAATG
GAAGAGAACA CGCCACGTGG TGTGGTAGTG CGCCTGACGT TGCCGCTCCA GCGCGGTTTC
GAACCAATGT CCGTACCGGT TCGCGCCGCT GCGGGCGCCG CCGATCTGCA ACATGCGCCT
GCCGGTGTGG CCCCGGCAGT TTCCCGATCC TGA
|
|---|
| Protein sequence | MRLSCAGPSR LNILWRDLLF VLCMNTVIAV SLNYGFRTAG TLLQNFAYSQ LIGLSIWVLI
DIPRVLIWWN DRPRRWPFMC LAVVAVPMGV VMGSWATREL LGLPEKSAAE TGDMLRMCLI
VGMLASASMI YFYWSREKLA YLERQAALDA LQREEAEKQL VRAQLMALQA QIEPHFLFNS
LANLDGLIAT DPRAARQLLQ RLIGFLRMSL SHTRAEHCTL AQEFELLRSY LDIQGMRFGA
RLDYEIDLPP ALAEAEIPPM LVQPLVENAV THGIEPCMRG GKIVLSARET GDGSLQVVIA
DTGVGFSQGN KGSKGGSGLG LTHVRERLAR IFGAAATMQM EENTPRGVVV RLTLPLQRGF
EPMSVPVRAA AGAADLQHAP AGVAPAVSRS
|
|---|
| |