| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1302 |
|---|
| Symbol | |
|---|
| ID | 4038105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1417721 |
|---|
| End bp | 1418242 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637976688 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_583456 |
|---|
| Protein GI | 94310246 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.607865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.107651 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATC AGGGCTTGAG CGAACGCCGA GCCCTGATGG TAATCGGCAT GAGCGCCAGC
GCCTATCGTT ATCAGCCAGC ACCGGACCGC AATCTGGCGT TGCGGGCGGA GATTGTGGCG
CTGGCTCACC GACATCGCCG CTACGGTTCG GGGATGATTT ATCTGAAGCT GCGGCAGTCG
GGCCAGTTGG TGAATCACAA GCGGGTCGAG CGGCTGTATG CAGAAGCGAA GTTGCAGGTG
CGCCGCCGCA AGCGTAAGAA GGTGCCGGTT TCGGATCGTC AGCCGCTGGG GCGGCCGTCG
GCGGCCAACC AGGTCTGGTC TATGGATTTC GTGTTTGACC GAACCGCGGA AGGCCGTGTG
ATCAAAAACT TGACCGTGGT CGACGACGCG ACGCATGAAG CCGTGGCCAT TGTGCCGGAG
CGAGCTATCA GCGGACACGG ACTGACGCGC ATTCTGGAAC GCGTGGCATT GCATCGCGGT
CTGCCGAAGG CGATTAGGTG TCGTGTCCCG GCTGATTGGT AA
|
|---|
| Protein sequence | MTHQGLSERR ALMVIGMSAS AYRYQPAPDR NLALRAEIVA LAHRHRRYGS GMIYLKLRQS
GQLVNHKRVE RLYAEAKLQV RRRKRKKVPV SDRQPLGRPS AANQVWSMDF VFDRTAEGRV
IKNLTVVDDA THEAVAIVPE RAISGHGLTR ILERVALHRG LPKAIRCRVP ADW
|
|---|
| |