Gene Rmet_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1287 
Symbol 
ID4038090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1406230 
End bp1407384 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content72% 
IMG OID637976673 
Producthypothetical protein 
Protein accessionYP_583441 
Protein GI94310231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.272363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.489405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATC TGGCCGGACA CCTGCAGCTG CGCCCGGGTG CTTCGGTACC CCACAGCCTG 
CACAGCACGC GCCGGGCCTG GGCCGCGCAG CTCGCGCCCG GTCGTTCGGT CGAAACCTGG
CCGGCCCTGC TGGCGGGGCT TTTCAGCCTG TGCGGCCATG CGCACCGTAC CGCCAGCCAG
CTGGCCATCA GCGCGGCTGC GCCCGGCCTG CTGCCCGTGA CCGACGCCGT GCCCGCCATC
CTGCAACGCG AAACTGCGCT GGAACACCTG CGTCGAATCG CGCTGGACTG GCCGCGCCTG
CTGGCCGATC CAGCGGCTGC GCAGGCAGCG GCGGCTCAGG CAGCCGAGAG CCTGCGCCGC
TGTCCGCTTA TCGCAGCGCC ACAGGAGGTT GCGCCCTGGC CCCGGTTACG CCAGTGGTTG
CAGGACGAGT GGCTGAAGAT GAACCCGGCC ACCTGGCTGC GGGCCTGGCA GGCCTGCGGC
GCCGACTGGC TCGACGACTG GAGCCGGCGC CACAACGGCT GGCTGCCGGC CCTGCTGCAA
GCCACTCGCC AGGGCGATAC GGCCTTGCCA CAGGCGCACA CCCAGGCCCT GCGTCCGCAT
GAGGGCGAGG CCGGCCTGCG GGCACTGGCC GAGGCGCTGG CTGCATCCGA TCACTTCGCT
CTGCAGCCGC GCTGGCAGGG GTGTACGGCC TGCACCGGCG CCTGGAATCG TCTGCACGAC
GCTGAGCCCG CCCAGCCCTG GACGGCCTGG GCCCTGCTGG GCAGCCGGCT GGCCGAATTG
GTGCGCCTGT GCCTGCCCGA TGCACCGGGT GAAACCGGGG CCGGCAGGCT GGCCTGGGGT
GCGCTGGCCA CCGGGCCTCG GCAGGGCCTG GCCTGGGTGG AAATGGCGCG TGGTCTTCTG
ATCCACCAGG TGGCGCTGGA CGAAAAACTG CCTGGCCAGC CATACCGGCT GCGCTCCGCC
CAGGTGCTGG CGCCTACCGA ATGGAACTTC CACCCCGAAG GCGTGGCCGC ACAGGCGCTG
GCCGCCCTGC CGCCAGACAT GCCCGGGCTT GCGGCCCGGG TGCGCCTGCT GATGGCAGCG
CTGGATCCCT GCGTTCCTTT CGAGATCGCG GCGCCTTTGG TGCACGATGC GCCTCTGGAG
GTCAACCATG CATGA
 
Protein sequence
MTDLAGHLQL RPGASVPHSL HSTRRAWAAQ LAPGRSVETW PALLAGLFSL CGHAHRTASQ 
LAISAAAPGL LPVTDAVPAI LQRETALEHL RRIALDWPRL LADPAAAQAA AAQAAESLRR
CPLIAAPQEV APWPRLRQWL QDEWLKMNPA TWLRAWQACG ADWLDDWSRR HNGWLPALLQ
ATRQGDTALP QAHTQALRPH EGEAGLRALA EALAASDHFA LQPRWQGCTA CTGAWNRLHD
AEPAQPWTAW ALLGSRLAEL VRLCLPDAPG ETGAGRLAWG ALATGPRQGL AWVEMARGLL
IHQVALDEKL PGQPYRLRSA QVLAPTEWNF HPEGVAAQAL AALPPDMPGL AARVRLLMAA
LDPCVPFEIA APLVHDAPLE VNHA