Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1279 |
Symbol | |
ID | 4038082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1399619 |
End bp | 1399882 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637976665 |
Product | putative transposase |
Protein accession | YP_583433 |
Protein GI | 94310223 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0690484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.046933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACCT GGGCGCATGA GCGGGGCGTG AAACTGTTTC TAATCGAGCC AGGCAAGCCG AACCAAAATG CCTATATCGA ATCGTTCAAT GGGCGCTTTC GGGATGAATG CCTGAACGAA CACTGGTTCA CCAGCCTGTC GCATGCCAAG GTCGTGATCG AAGCATGGCG GCGGGAATAT AACGAGGAGC GACCGAAGAA ATCACTGGGC GGATTAACGC CCGCATCCTA CGCCAAAAGA CTGAGCGAAA AAGCGTTACA TTAA
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Protein sequence | MLTWAHERGV KLFLIEPGKP NQNAYIESFN GRFRDECLNE HWFTSLSHAK VVIEAWRREY NEERPKKSLG GLTPASYAKR LSEKALH
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