Gene Rmet_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1279 
Symbol 
ID4038082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1399619 
End bp1399882 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content53% 
IMG OID637976665 
Productputative transposase 
Protein accessionYP_583433 
Protein GI94310223 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0690484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.046933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCT GGGCGCATGA GCGGGGCGTG AAACTGTTTC TAATCGAGCC AGGCAAGCCG 
AACCAAAATG CCTATATCGA ATCGTTCAAT GGGCGCTTTC GGGATGAATG CCTGAACGAA
CACTGGTTCA CCAGCCTGTC GCATGCCAAG GTCGTGATCG AAGCATGGCG GCGGGAATAT
AACGAGGAGC GACCGAAGAA ATCACTGGGC GGATTAACGC CCGCATCCTA CGCCAAAAGA
CTGAGCGAAA AAGCGTTACA TTAA
 
Protein sequence
MLTWAHERGV KLFLIEPGKP NQNAYIESFN GRFRDECLNE HWFTSLSHAK VVIEAWRREY 
NEERPKKSLG GLTPASYAKR LSEKALH