Gene Rmet_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1253 
Symbol 
ID4038056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1375516 
End bp1375833 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content67% 
IMG OID637976639 
Producthypothetical protein 
Protein accessionYP_583407 
Protein GI94310197 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0764365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGGC GTTTTCAACC GATGGAGGTT CACATCATGC GTCCCGCTCC CTTGCGGCCT 
GCCGCCACTG TCTCGACTGC TGCCGCGCAG CCGCAGCGTT ATCTCACCAA CGACGAAGCC
GCCGAGTACC TGCGCCTGTC GCCGCGCACG CTGGAAAAGC AGCGTGTGAT CGGCGGTGGC
CCGCGCTTTC GCAAGTTCGG CCGGCGTGTC ATGTACGCCG TGGCCGACCT CGATGCCTGG
GCCGCCGACC GCAGCTTCGA GACGACTTCC GATCCCGAAT ATGCCGAGCA CCACTCGGCC
GACAGCCGTG CGCGCTGA
 
Protein sequence
MAGRFQPMEV HIMRPAPLRP AATVSTAAAQ PQRYLTNDEA AEYLRLSPRT LEKQRVIGGG 
PRFRKFGRRV MYAVADLDAW AADRSFETTS DPEYAEHHSA DSRAR