| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1198 |
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| Symbol | |
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| ID | 4038000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1317096 |
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| End bp | 1317692 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637976584 |
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| Product | 20S proteasome, A and B subunits |
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| Protein accession | YP_583353 |
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| Protein GI | 94310143 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000168081 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.567308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCT GCGTTGTCGT CAGGAAAGGT GACGAGGTGG CGATCGGTGC CGATGCGCTG
GTGACATTCG GCGATACGCG GCTGTCGCGC GCTTATGAGC GGAACCAGAA GGTGATTCCC
GTTGGCGACA GCTTCGTCGG GCTGGCAGGC ACCACCGCGC ATTTCCCGGT CATGCGCAGC
TTGCTGACGG GCATGGGCGA GGAATGCCGG CTGCATACCC GTGACGATGT GTTCCGAACC
TTTCTCAAGG TGCATGAAAA GCTCAAGAAC GAGTATTTCA TCAACACCAA GGAAGACGAG
GACGACCCCT ACGAGTCATC GCAGATCGTC TGCCTGATCG CCAATTCGGG CGGCATTTTC
GGCGTTTATT CGTACCGCGA GGTGTTTTCG TTCGATCGTT TCTGGGGCAT TGGCTCGGGC
CGCAACTACG CGCTCGGCGC CATGCACGCG GTGTATGACC GCACGGACCT GGATGCCGGA
GCGATCGCGA GGATCGGCGT GGAAGCGGGT ATCGAGTTCG ACAAGAGTTC GGCGGCACCG
ATCGACGTGC ACACGGTACG GCTGCAAGTG GCAACCAACA AAGACGGCGC GGCCTGA
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| Protein sequence | MTTCVVVRKG DEVAIGADAL VTFGDTRLSR AYERNQKVIP VGDSFVGLAG TTAHFPVMRS
LLTGMGEECR LHTRDDVFRT FLKVHEKLKN EYFINTKEDE DDPYESSQIV CLIANSGGIF
GVYSYREVFS FDRFWGIGSG RNYALGAMHA VYDRTDLDAG AIARIGVEAG IEFDKSSAAP
IDVHTVRLQV ATNKDGAA
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