| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1121 |
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| Symbol | |
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| ID | 4037919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1224155 |
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| End bp | 1227289 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637976503 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_583276 |
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| Protein GI | 94310066 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAT TCTTCCTTCG CCGACCCGCC TTCGCGTGGG TGCTGGCAAT TCTGACCATG
GTTGCGGGGC TCGTTGCCCT GAACAGCATT CCGGTGGCCC AGTACCCGGC GGTGGCCCCA
CCGACGGTCA TTCTCTACGC CGACTACCCG GGCGCCACCG CGCGCACGGT GGAAGACCGC
GTCACGGCCG TGCTTGAACA GCAGATGCAT GGGATACCGG GGCTGCTCTA TATCGACTCG
AGCAGCGAGG CCGGCACGGC CACGGTCACC ATCGGCTTCC GGCAAGGCAC CGATCCGCAA
CTCGCGCAGG TGAACGTGCG CAACCGCGTG TCCCAGGCCG AGCCGCTGCT GCCCGAAGTG
GTGCGGCGCG GCGGGGTCTA TGTCGATCAG GCCAGCGCCA GCCCGTTCAT GTACGTATCG
CTGATCTCGA AGACAGGCAC GATGTCCGAG ACCGCGCTGG CCGACTATGC CGCCGGCACG
GTCCTGCCCA TGCTGCGGCG GCTGCCCGGC ATCGGCAAGG TGGAGGCATA CAGCGCCGAG
TACGCGCTGC GCGTCTGGTT CAATCCCGAC CAGCTCAATG CCTATGGCCT GACCACGGCC
GATGTGGAAG CCGCAATTCG CGCGCGCAAC GGCAGCGTCA CGCCGGGCCA GCTTGGCGGC
GCGCCATCGA AGCCCGGGCA GTCCTACCAG GCGGTCGTGC GTCCGCCTGC GCCGTTGGCT
GACCCCGAAG CGTTCGGCCG CATCGTGCTG CGCTCGGCCG CCGATGGCTC CGCCGTGTTG
CTGCGCGACG TGGCGCGCGT GGAGATGGCC GCAGCCGACT ATCGCTACAG CTCCACGCTC
AATGGCCGCG AGGCCGCCTC GATGGGCCTG AAGCTCGCGG ACGGCGCCAA CGTGCTGGCC
ACTTCGCGCA CGGTCCGGGA CGCGCTCGAC GAGGCCGCCA AGGCCTTCCC GGCTGGCGTG
GCGTATGACA TCTCGTACGA CACCGCGCAC TTTGTTCAGA GCTCGATTTC GCGCGTGCTG
ATGACGCTGG CCGAGGCCAC GGTGCTGGTG TTCCTGATCC TGTACCTGTT CCTCGGCAAC
CTGCGGGCCA CGCTGATCCC GTGCATCGTC GTGCCGGTGT CGCTGCTCGG TACGGTGGCA
TGTCTCTACG CGTTCGGGCT GTCGCTGAAC GTGATCACGC TGTTCGGCGT GGTGTTGGCT
ATCGGCATTC TGGTGGACGA TGCGATCGTT GTGGTCGAAA ACGTCGAGCG GATCATGCGC
GAGGAAGGCG TCGATGCCTT TACCGCGGCG TCGCGTTCGA TGCGCGAGGT CTCGGGCGCG
CTGCTCGCGG TGACGCTGGT GCTCTGCGCC GTGTTCGTGC CGATGGCCTT CCTGGGCAGC
GCCGTGGGGG TGATCTATCG CCACTTCGCC ATGACACTGG CCATCTCGAT CGCGTTCTCG
CTGTTCTTCG CGCTGTCGCT GGCGCCTGCG ATGTGTGCTT CGCTGCTACG CCACGGCGCC
CAGCCCGCAC GCGGGCCGCT AGCGTGGTTC GAGCATCGCT TCACCGCGTT CACCACGCGC
TATGCCGGCT GGGTGCAGCG GCTTCAGCAA CGCCGCCTGC GGTGGCTCGC GGTCTATCTG
GCCATGGCCG CGGTCTGCGC GGTTGGGCTC TGGCAACTGC CGAGTGGCTT TCTGCCCGAG
GAGGACACTG GTGAACTCGT GATCGACGTG GAACTGCCGC CGGGCAGCAC CCAGGCGCAG
ACACGGGAGA CCATCGCGCA ACTGGAACAG TGGATGAAAC AGGAGCGCCT GCCGGTCAAG
ACGTCGTTCG CGCTGCTCGG CTGGAACAGC GGCGGATCTG GCGAGCAACG CGCCAGCGTG
TTCCTGTCGC TCGACGACTG GAAGCTGCGC GGCCGCGAGA ACGCGGCGGA CGTCGTGCTG
GCACGGCTGA CCAAGGGCCT CGAGGAATGG CCCGGACGCG GCGATGCCCA GCTCTACCCG
TACAACGGCA CTGCGCTGCC GGAACTGGGC AGCACCAGCG GGCTGGACAT GCGGCTCGTC
ACGCGACTGG AAGGCGGACG TCCGAGCCTC TACGCCGCGC GCGACAAGCT GATCGAACGC
GCCAAGGCCG ACCCCGTGTT CGCCGAAGTC CGCGCCACGG CGGGCCAGCC CGTGCCCGCG
CTCGACCTGG CGATCGACTA CCGCAAGGCC GAGAGCTTCG GCGTCGATAC CGAGGCGATC
CACCACGCGC TGGCGGCCAC GCTCGGCTCC CGCTACATCG ACGAACTGGC CCGCGACGGT
CGCGTGCGGC GCGTGATCCT TCAGGCGGAT GCGCCGTTCC GAATGCAGCC GGAGGATCTG
GCACGCCTGC ACGTGCGCAA CGCGCAGGGC CAGATGGTGT CGCTCGGCGC GTTCGCCACG
CTGGAATGGG GCAACGGCGA GGCCACGCTC GAACGCTACA ACGGCTTGAT CTCGGTACGT
ATCAATGCCG ACGTGGCGCC GGGCACCAGT ACCGGTACCG CGATGACGCG GCTTGAATCG
CTGGTGCGTG AACTCGGCCC CGACTACGAG GTGCGCTGGA GTGGCCGCGC GTTCGAGCAG
CAGCAAAGCG GCACGCAGGC GCCGTGGCTG TTCGCGCTGT CGATGCTGTT CATCTTCCTG
TGCCTGGTGG CGTTGTACGA AAGCTGGACG CTGCCGCTGG CGGTGCTGGC GATCGTGCCG
GCCGGCCTGG TCGGCGCCGC GTCGGCCGTA TGGCTGCGCG GGCTGCCCAA CGATGTCTAC
TTCAAGGTCG GCGTGATCGT GATCATGGGG CTCGCGGCCA AGAACGCGAT TCTCGTGGTC
GAGTACGCCG AGCAACTGCG GCGCAATGGA CTGGAGCGCG TGCAGGCCGC CACCCAGGCG
GCACGTCAGC GGCTACGTCC GGTGGTGATG ACCTCGCTCG CGTTCATCCT TGGCGTGGTG
CCGCTGGCGA TCAGCACCGG CCCCGGCGCC GGCGCCCAAC GTGCGGTGGG CACGGGCGTG
CTGGGCGGCA TGCTCGGCGC GACGATCCTC GGCACGCTGG TCATCCCGCT GCTCTATGCC
TGGATCGCCC GCTGGTCGAA AGCGCGCGCC ACCACCGAAC CCGCCAAGGC TCCGGCCTCT
GAACCCGGCG CCTGA
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| Protein sequence | MAQFFLRRPA FAWVLAILTM VAGLVALNSI PVAQYPAVAP PTVILYADYP GATARTVEDR
VTAVLEQQMH GIPGLLYIDS SSEAGTATVT IGFRQGTDPQ LAQVNVRNRV SQAEPLLPEV
VRRGGVYVDQ ASASPFMYVS LISKTGTMSE TALADYAAGT VLPMLRRLPG IGKVEAYSAE
YALRVWFNPD QLNAYGLTTA DVEAAIRARN GSVTPGQLGG APSKPGQSYQ AVVRPPAPLA
DPEAFGRIVL RSAADGSAVL LRDVARVEMA AADYRYSSTL NGREAASMGL KLADGANVLA
TSRTVRDALD EAAKAFPAGV AYDISYDTAH FVQSSISRVL MTLAEATVLV FLILYLFLGN
LRATLIPCIV VPVSLLGTVA CLYAFGLSLN VITLFGVVLA IGILVDDAIV VVENVERIMR
EEGVDAFTAA SRSMREVSGA LLAVTLVLCA VFVPMAFLGS AVGVIYRHFA MTLAISIAFS
LFFALSLAPA MCASLLRHGA QPARGPLAWF EHRFTAFTTR YAGWVQRLQQ RRLRWLAVYL
AMAAVCAVGL WQLPSGFLPE EDTGELVIDV ELPPGSTQAQ TRETIAQLEQ WMKQERLPVK
TSFALLGWNS GGSGEQRASV FLSLDDWKLR GRENAADVVL ARLTKGLEEW PGRGDAQLYP
YNGTALPELG STSGLDMRLV TRLEGGRPSL YAARDKLIER AKADPVFAEV RATAGQPVPA
LDLAIDYRKA ESFGVDTEAI HHALAATLGS RYIDELARDG RVRRVILQAD APFRMQPEDL
ARLHVRNAQG QMVSLGAFAT LEWGNGEATL ERYNGLISVR INADVAPGTS TGTAMTRLES
LVRELGPDYE VRWSGRAFEQ QQSGTQAPWL FALSMLFIFL CLVALYESWT LPLAVLAIVP
AGLVGAASAV WLRGLPNDVY FKVGVIVIMG LAAKNAILVV EYAEQLRRNG LERVQAATQA
ARQRLRPVVM TSLAFILGVV PLAISTGPGA GAQRAVGTGV LGGMLGATIL GTLVIPLLYA
WIARWSKARA TTEPAKAPAS EPGA
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