| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1100 |
|---|
| Symbol | |
|---|
| ID | 4037898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1197120 |
|---|
| End bp | 1198538 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637976482 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_583255 |
|---|
| Protein GI | 94310045 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0132034 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCCG CGCTCAGCCT CTACAACTCG CTGACCCGCA AGAAGGAGCC CTTGCGGACC
GGGCAGCCGG GCCGCGTCAC GATGTATGTC TGCGGGCCAA CGGTCTACAA CTTCGCGCAT
ATCGGCAATG CCAGGCCGGC CGTTGTCTTC GACGTGCTGG CGCGGCTACT GCGCGAGCAA
TACGCAGAAG TGGTCTACGC CCGCAACTTC ACCGATGTGG ATGACAAGAT CAACGCGAGC
GCGGCGGCGG AGGGCGTACC TATCGGCACC ATTACAGCGC GCTATATCGA TGCCTACCAC
GAAGACATGC GCGCGCTGGG CGTGTTGATT CCTGACCTGG AGCCGCGCGT CACCGAGCAC
ATCCCCGCGA TCATTGCGTT GATACAGCGG CTGATCGCAA ATGGGAATGC CTATGTCGAA
CAGGATCATG TCCTGTTTCA CGTGCCGTCC TTTCCCGCGT ATGGCCAACT TTCGGGTCGC
CGACCTGAGG ACATGCTTGC CGGCGTGCGT GTCGACGTCG CACCGTACAA GCGCGATCCG
CTGGACTTTG TCCTCTGGAA GCCGTCCACT GCCGAGGTTC CGGGCTGGCC GAGTCCGTGG
GGACGCGGGC GACCAGGTTG GCATATCGAA TGCTCAGCCA TGATCGGGCA ACACCTGGGA
AGCACGATCG ACATCCACGG GGGTGGTCAG GATCTGATAT TCCCGCATCA CGAGAATGAG
ATTGCCCAGG GCACTTGCGC GAATGGCGAG TTGTACTGCC GCACCTGGGT TCACAACAGC
TTCGTTACCG TGGACGGTCA GAAGATGTCC AAGTCGCTCG GCAACGTTCT GCTGCTGCGC
GATCTGCTGG GTCAGGCGCC GGGGGAAGCG ATACGACTGG CGCTGCTTTC GGCGCATTAC
CGGCATCCTC TCGACTGGAA CGCGCAGCGT CTGTTGACGG CGCGCCAGAC GCTGTTGCGC
TTCTACCGGG GGCTGAAGAT GGCCGAACAC ATCGAGATCT CGCCCGGCGA AGAGCCCGAC
GAGGAGGTAA TCGCGGCTCT CAACAATGAT CTGAACATTC CGGGTGCGCT GGCGCGACTC
CACGTGTTGC TCGCCGAGTT GGAAAAGGCA GGTGCTGATG CCAGCCGATC CGTGGCCAAG
GCACGGATGA TGGCGTCGGG ACGGTTGCTC GGATTGTTCC AGCAGGATCC AAACTCCGCG
CTCCGGGGAC TGGCCGGGGC AGCAGTCACC CATGGAATCG CCACTACTGC GGACGCGGCA
CGGATCGACC ATCTGGTCGC GGAGCGCGAG CAGGCCCGCA AGCGCCGCGA CTTCGCACGG
GCAGACGCAC TGCGTGAGGA ACTTGGCGCG GCCGGTGTCC TGGTTCACGA CACGCCCAAT
GGGAGTACCT GGACCCTTGT CGATGGAACT CCAGCATAA
|
|---|
| Protein sequence | MTSALSLYNS LTRKKEPLRT GQPGRVTMYV CGPTVYNFAH IGNARPAVVF DVLARLLREQ
YAEVVYARNF TDVDDKINAS AAAEGVPIGT ITARYIDAYH EDMRALGVLI PDLEPRVTEH
IPAIIALIQR LIANGNAYVE QDHVLFHVPS FPAYGQLSGR RPEDMLAGVR VDVAPYKRDP
LDFVLWKPST AEVPGWPSPW GRGRPGWHIE CSAMIGQHLG STIDIHGGGQ DLIFPHHENE
IAQGTCANGE LYCRTWVHNS FVTVDGQKMS KSLGNVLLLR DLLGQAPGEA IRLALLSAHY
RHPLDWNAQR LLTARQTLLR FYRGLKMAEH IEISPGEEPD EEVIAALNND LNIPGALARL
HVLLAELEKA GADASRSVAK ARMMASGRLL GLFQQDPNSA LRGLAGAAVT HGIATTADAA
RIDHLVAERE QARKRRDFAR ADALREELGA AGVLVHDTPN GSTWTLVDGT PA
|
|---|
| |