| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1086 |
|---|
| Symbol | |
|---|
| ID | 4037883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1178073 |
|---|
| End bp | 1178858 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637976467 |
|---|
| Product | HhH-GPD |
|---|
| Protein accession | YP_583241 |
|---|
| Protein GI | 94310031 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0200313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0245193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACGCTG CCGCGCGCAA GCCGAAGGCG GTTGCACCTG CCCAGCCGAA GCCGGTGGCG
GGGAAGGCTG CCGCCAAGGT CGCGCCAAAG GCCGGCGGCA AGCCCCGCAA ATCGGACCTG
CCCGAGGTGG ATGCGGTACC CCTGCCGGTC GAAACCGTCG TCGACGCGGT GCGGCCCGCT
TATTGGGACG AGGCGTGTGC TGACCTGATG AAGCGCGACC GCATCCTGCG CAAGATGATT
CCTACCTATG GTCCGGCGCA TCTGGTGTCG CGTGGCGATC CGTTCGTCAC ACTGGCGCGC
TCGATCGTCG GCCAGCAGAT ATCGGTGAAG GCCGCGCAAT CGGTCTGGGA ACGGCTCGCC
GCCAGGTGCC CGCGCCTGAC GCCGGCGCAG TTCCTGAAAT CCGGGTCCGA GGAGTTGGCT
GGTTGCGGGT TGTCGAAGCG CAAGGCGGAG TACATCATTG ATCTGGCCGA CCACTTCAAG
GCGGGGCGCG TGCACGTCAA GGAATGGGTG GCGATGGACG ACGAGGCAGT GATCGCCGAG
TTGACCCAGA TCCGCGGCAT CGGACGCTGG ACGGCGGAGA TGTTCCTGAT GTTCAATCTG
ATGCGACCCA ACGTGCTGCC GCTCGACGAT GTCGGGCTGA TCAACGCGAT CTCCACCAAC
TACTTCAGCG GAGAACCGGT GACACGTAGT GAGGCACGCG AGGTGGCCGC CAACTGGGAG
CCGTGGCGAA CGGTGGCGAC GTGGTACATG TGGCGCAGTC TGGACCCCCT GCCAGTGACG
TATTAG
|
|---|
| Protein sequence | MNAAARKPKA VAPAQPKPVA GKAAAKVAPK AGGKPRKSDL PEVDAVPLPV ETVVDAVRPA
YWDEACADLM KRDRILRKMI PTYGPAHLVS RGDPFVTLAR SIVGQQISVK AAQSVWERLA
ARCPRLTPAQ FLKSGSEELA GCGLSKRKAE YIIDLADHFK AGRVHVKEWV AMDDEAVIAE
LTQIRGIGRW TAEMFLMFNL MRPNVLPLDD VGLINAISTN YFSGEPVTRS EAREVAANWE
PWRTVATWYM WRSLDPLPVT Y
|
|---|
| |