Gene Rmet_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0901 
Symbol 
ID4037697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp988843 
End bp989553 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content59% 
IMG OID637976281 
ProductTetR family transcriptional regulator 
Protein accessionYP_583056 
Protein GI94309846 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCA AACCGCAAGC CGGTCCCCGT CGTACCCGGG ATCGCATTCT CGACGTCTCG 
CTGCGCCTGT TCAATGAACT TGGCGAGCCC AACGTCACCA CGACGACGAT TGCGGAAGCC
ATGGAAATCA GTCCTGGCAA TCTCTACTAC CACTTCCGCA ACAAGGACGA CATCATCAAT
TCCATCTTCG TGCGCTTCGA GCAGGAGATG GAGCGTCGCC TCAAAATGCC GGAAGACCAC
AAGGCCACAT TGGGGGAGAG CTGGGGCTAT CTGCAGTACA TGTCCGAGTT TCTGTGGAAC
TACCGTTTCC TGTATCGCGA CATCAACGAC CTGCTGGCGC GCAACCGGAT GCTGGAGACC
AACTTCAAGC GCATCGTCGA TCAGAAGAAG CGCTTCGCGC TCGAGATCTG CCGCCAGTTC
CAGGAAGATG GCGACATGGA CGCCACGCCG GAACAGGTGG ACGCGATCTG CACCAACATT
GTCGTGATCG CCACGTACTG GCTGTCGTTC CAGTTCGTGC AGCACCCGCG CCAGTACAAC
GACCCCGAAC AGATTCGCGG CTATCTGCAT GGGTCGAGCT ATCACATCTT CTCGATTCTC
GCGCCGTACC TGCGTGGCAA GGCGCGCGAG GCATTCGACC AGCTTGCGCG CGAGTACGCG
GCGGAGAAGG CCGCAGCGGA TGCCGCAAAG CTTGAAAAGG ACAGAAAGTG A
 
Protein sequence
MEAKPQAGPR RTRDRILDVS LRLFNELGEP NVTTTTIAEA MEISPGNLYY HFRNKDDIIN 
SIFVRFEQEM ERRLKMPEDH KATLGESWGY LQYMSEFLWN YRFLYRDIND LLARNRMLET
NFKRIVDQKK RFALEICRQF QEDGDMDATP EQVDAICTNI VVIATYWLSF QFVQHPRQYN
DPEQIRGYLH GSSYHIFSIL APYLRGKARE AFDQLAREYA AEKAAADAAK LEKDRK