| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0627 |
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| Symbol | |
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| ID | 4037416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 689436 |
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| End bp | 691403 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637976002 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_582782 |
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| Protein GI | 94309572 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.080409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAC CCTTCATTAC CGTACCTATT GCCTTGTCAT GCACGCGCAG TGCAACGATC
ACCCTGCCGT GGTTCGTCCA GTGCACCGAG TACAACCCAG CGCCCGCCAC CTTCAAGCCG
CTGGTGAACG GCGAGACGGC ATTTCGTGAC ATTTACGACG CGATTTTCCT TGCCGTGAAA
AGCGTGGACA TCATCTGCTG GGGTTTCCAG CCGTCCATGT TCTTCAAGCG TGGCGCAGGC
GGACAGGGAA CAAAATGCAT TGGCGAATTG CTGGAGGACG TAGGCAAGCG CGGCGTTAAG
GTGCGCTTGC TGTGTTGGGG TGGGCAGGTG CTTGGCCTAC CGGAAATCAA CAACAGATTC
GGCCCCGAGC CAAACATGCC ACACCGGCCC GCCGCTCACA TGAGGCCAAG ACCGCACCCG
AGCAGGCATG CCGAGGACTT CGATCGCTGG TGGTACTGGT CGGTCGCGCA GAAAGATCCG
AGAAGGCTGA CGTTTCGCAA TGTGGTCATG GACCCATCGG TCATTGCCAG ACACATCCCC
TCGGTCTGGC AATTGGCGGC GCTGAAGAAT GTCGAGTTCA TGACGCGGGA CTTCGATTTG
CCGAGCCGGC TGGAGATTGC CTTCAGGACC AGCCTGTTCG GTGCGGACAA GCAGCGCGGC
GCGGGCAACA AGGCTGCCGG AGGGGCGGCC ATGGGCCTTG CCGCGCCGAC GCATCACCAG
AAAATGGTGT TGGTCGATTA CGAGGTCCCG AACAAGGCGG TTGGATACGT GATGGGACAC
AACATGCTGG ACCCGTACTG GGACACCGAT GACCACAGTG CGGCCAAGAT GCCGTGGGGG
TATCTTGGTC GCAATGGCGC GACACCGAGG CACGACATCT CAAGCCGGGT GACCGGCCCA
ATTCTCCAAT ACCTCAACGA CAATTTTTGC GAAGCGTGGG ATCGGGAAAC TGGCGCCGGT
CTGGGTAAGG CGCGCAAGCC AGCCGCAGCC GGTCTCAGAA TGCTACCGTC GCTAGGCGAC
AAGGTGATGG CCCAGGTGCT GCGCACACAC TCTCAGAACG GCAAGCAGGA CATCGAAGAA
ATGTATCTCC AGGCGGTGAA CAATGCGACG CAGTTCATCT ATATCGAGAA TCAGTACTTT
CGGTTCAAGC CCCTGGCGGA CAAGATCAAT GAAGCGGTAA AGAAGCAAAT CCAGTGGGGG
CGCGACCCCG GTCAACACGG GGCCATCCAT CTCTTTGTGA TCACGAACTC CAGCGACGAG
GGTATGGGCG ATGGGACGGT CAACACCTAC CGCATGCTCA ACGCGCTGGG ACGGGCCGAA
GTCATTCCGG GCGTGGCGAA GCTGGAGCAG GAAGATGTTC GCCAGGCCGA TCTGCAGCGC
CAGTATGACG CGGCCAGAGC ACAAGCGAGG GAAGCCCAGG GAGCGGTTGC CAGGGTGTAT
CAGTTCACCC ATCTCGGCGA TGCATATGTG CAGAAGTTGC TGGCTCGAGC CGAAGAGAAG
CTTCAGCAGG CCCGCGCGAA ACAAGCGGAG GTAAAGGCGC AGATGAAGGC GCCACCCAAT
GCTGTCCTGC CTGCACCGAT TGACGGCTTG AAGGTCCACA TCTGCACCCT CGTAGCACCC
GACTCGCCGC CGGACAAGTG GCAGGACGTG TATATCCACG CCAAGCTGAT GATCGTGGAC
GATGTCTTCA TGACGCTGGG ATCGGCCAAT ATCAACACGC GCAGCATGGA GGGCGACAGC
GAACTGAACA TCTGCCATGA GAACGAGGCA GTGACGCGGC CATTGCGCCG GAAACTTTGG
CATGACCATA CGAAGGGGAT GGGCGATCAC GATGATCCGG CGGAAGCATT CAAGCAGTGG
GGGAAGATCA TCAGACGGAA TGCAGATAAT CGGAACAATG GGAACGCCCC AGAATCGTCG
CTGATTGAGT TCAGCCGCAA AGATCCGAAG CGGACCTACA AGGACTGA
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| Protein sequence | MTQPFITVPI ALSCTRSATI TLPWFVQCTE YNPAPATFKP LVNGETAFRD IYDAIFLAVK
SVDIICWGFQ PSMFFKRGAG GQGTKCIGEL LEDVGKRGVK VRLLCWGGQV LGLPEINNRF
GPEPNMPHRP AAHMRPRPHP SRHAEDFDRW WYWSVAQKDP RRLTFRNVVM DPSVIARHIP
SVWQLAALKN VEFMTRDFDL PSRLEIAFRT SLFGADKQRG AGNKAAGGAA MGLAAPTHHQ
KMVLVDYEVP NKAVGYVMGH NMLDPYWDTD DHSAAKMPWG YLGRNGATPR HDISSRVTGP
ILQYLNDNFC EAWDRETGAG LGKARKPAAA GLRMLPSLGD KVMAQVLRTH SQNGKQDIEE
MYLQAVNNAT QFIYIENQYF RFKPLADKIN EAVKKQIQWG RDPGQHGAIH LFVITNSSDE
GMGDGTVNTY RMLNALGRAE VIPGVAKLEQ EDVRQADLQR QYDAARAQAR EAQGAVARVY
QFTHLGDAYV QKLLARAEEK LQQARAKQAE VKAQMKAPPN AVLPAPIDGL KVHICTLVAP
DSPPDKWQDV YIHAKLMIVD DVFMTLGSAN INTRSMEGDS ELNICHENEA VTRPLRRKLW
HDHTKGMGDH DDPAEAFKQW GKIIRRNADN RNNGNAPESS LIEFSRKDPK RTYKD
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