Gene Rmet_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0604 
Symbol 
ID4037393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp653264 
End bp654487 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content67% 
IMG OID637975979 
Productesterase/lipase-like protein 
Protein accessionYP_582759 
Protein GI94309549 
COG category[R] General function prediction only 
COG ID[COG1647] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.163166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.45862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGC AACAGGCTCC ACGCATCGGA GCCCTGCTGA TTCACGGCTT GGGCGGTACC 
CAGTACGACC TCGGGCCGAT GCACAAGGTG CTGCGCCGCG CGGGCGTGGA GACGCACGCC
GTCACGCTGC CCGGTCATGG CGGCGTGCCC GAGGACCTGT TGCCCGTGGT GGCGGAGCAG
TGGATTGACG TGGTGACCCA GGCCTACGAC GAACTGGTCG GCCAGTACGA CACGTTTCAT
GTCATCGGCA TGTGCATGGG AGCGCTGCTC GCGCTGGAAC TGGTCGCGCG GCGCCAGCAT
CGCAAGGGCC AACTGGTGGC GCTGGCCGCC CCGGTCTATA TCGACGGCTG GTCCACGCCG
TCCTACCGCT GGCTGCGGCA CGTGGTCTAT CACCTGCCGG GGCTGCCCAC GCGTATCAAG
GTGGAGGAGA ACGAGCCGTT CGGCATCAAG AACGACCTGG TGCGCGCCAT CGTCAAGGCC
AAGTTCGAGC GCGGCGACAA CTTCCACTAT CGCTGGGTGC CGTTGACCTG CATCCGGCAG
GTGGACCGTC TGCGCCGCTG GGTGCTGGAC AGCGCGCACC GCGTGCCTTG CCCGACGCTG
GTCGTCAACG CGCGCGAGGA CGAGCTGACC ACGTTGCGCT CGTACGATTT CCTGCTCGGC
GCGGTGCCGC AGGTGCGGGG TGTGGTGCTC GAGAACAGCT ATCACATGAT CTGTGTGGAT
AACGATCGCG AGCAGGTCAT CGCCAGCGTG CTCGAGTTCC TGGGGCTGGA GGCGTCCGCC
GGCAGACCCC GCGCGCGTCG GTCGGTGGAG ATGCCGATGG CTGCGGAAGC CGTCGCCACG
CTGGTGGGCG AGTATCTCTC CGCGCTGACC ACGCGGCATT TCGAGACCGT CTATCCGCTG
CTCGATCCGG CCATTGAATG GCGCCATCTG GGTGAGCATC CGCTGGCAGG GGTCTATGCA
GACCGGGATG CCGTGATCGG TCTGTTCCAG CGCGTGGAGC AACTGGCTGG CGATAGCGTA
CGGATCGAGG TGGCCGGCGC GCCGCGCATC GACGGCCAGA CGGTGGAAAT CGACATCGCG
GCGTCGTACC GGTTCGACGG TCAGCCGATG GATGGCCGTG GCACGCAGAC GCTACGACTA
GCCAACGGCC GCATCCGCGC GGTCGAGTAC CGTCCCGAAT CGGCGGCGGA CAGCGATGCG
CCGCTGGTCC GCCAGGCGGG CTAG
 
Protein sequence
MTTQQAPRIG ALLIHGLGGT QYDLGPMHKV LRRAGVETHA VTLPGHGGVP EDLLPVVAEQ 
WIDVVTQAYD ELVGQYDTFH VIGMCMGALL ALELVARRQH RKGQLVALAA PVYIDGWSTP
SYRWLRHVVY HLPGLPTRIK VEENEPFGIK NDLVRAIVKA KFERGDNFHY RWVPLTCIRQ
VDRLRRWVLD SAHRVPCPTL VVNAREDELT TLRSYDFLLG AVPQVRGVVL ENSYHMICVD
NDREQVIASV LEFLGLEASA GRPRARRSVE MPMAAEAVAT LVGEYLSALT TRHFETVYPL
LDPAIEWRHL GEHPLAGVYA DRDAVIGLFQ RVEQLAGDSV RIEVAGAPRI DGQTVEIDIA
ASYRFDGQPM DGRGTQTLRL ANGRIRAVEY RPESAADSDA PLVRQAG