| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0564 |
|---|
| Symbol | |
|---|
| ID | 4037353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 604054 |
|---|
| End bp | 606318 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637975939 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_582719 |
|---|
| Protein GI | 94309509 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.323456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC GTCAACCGAC CGCTGTCACA TCGACAGCGG AGGCACCCTC ACCGGCCGCG
ACCGCGCTCG CCGGGTTTCT TCCACCAGTT CCGCCTACCG CCATTGCGCA CGCCGCATGG
GAGTACGGCC TCGATGCGTG GCAACGCTCG ATCCTGTTCC TCGACATCCT TCGGCAGCGC
GGCAATGAAA CCGCGGAGCA CGAGCGCGGT GGTATGCCGC CAGTGCTGGT TTTCGACTAC
GAGGTACTGA TCGACGGTCG CGATTTGCCG ACGCCGGTCA ACTACGCGCT GGTTCGCATC
GTGCCACCTG AAGGGCAACC GACGGACCCG GCCAAGCGGC CGTTCGTGGT GATGGACCCC
CGCGCGGGGC ACGGTCCCGG CATCGGCGGG TTCAAGTCCG ACAGCGAGAT TGGCAACGCG
CTGCGCAGTG GGCATCCGTG TTACTTCATC ACGTTCTTCC GCGATCCTTG CCCGGGGCAG
ACGATCGAGG ACGTCGCGCG TACGGAAGGC CTGTTTCTGC AGGCGGTCGC CGAGCGCCAC
CCCGATGCGC CCGGCAAGCC ATTCGTCGTC GGCAACTGTC AGGCAGGCTG GGCCCTGCTG
ATGCTGGCGG CTGCCGCGCC GGAAGTCACC GGCCCGATCC TGCTGGCTGG CGCGCCTGTG
GCGTACTGGT CCGGAGTGCG TGGCAAGAAT CCGATGCGGT ACTCGGGTGG CCTGCTTGGC
GGCACCTGGC TGGCATCGCT GGCTGCGGAT CTGGGCAATG GCCGCTTCGA CGGCGCCTGG
CTCGTCCAGA ACTTCGAGAA GCTCGATCCC GCGAACACGT TCTGGTCGAA GCTCTACAAC
GTTTATGCCA AGGCCGATAC CGAGGGTCCG CGTTTCCTGG AGTTCGAGCG CTGGTGGGGC
GGCCACTTCC TGATGAACCG GGGAGAGATC GACTGGATCG TGCAGAACCT GTTCGTCGGC
AACCATCTCA CAGCGGGTGA GGTGCGCAGC AACGACGGCA AGACGGTGAT CGACCTGCGG
AACGTGCGCT CGCCGGTGAT CGTGTTTGCC TCCTGGGGCG ACAACATCAC GCCGCCGCAG
CAGGCGCTGA ACTGGATTCC CGATCTCTAC GCGAACGTTG ACGAGATCGT CGCCAACGAC
CAGACCATCG TCTATTGCCT GCATCCTTCG ATCGGCCACC TCGGCATCTT CGTATCGGGC
AGCGTGGCCA ACAAGGAACA CTCGGAACTC TTCTGCGCGC TGGACCTGAT CGACGTGCTG
CCGCCGGGCC TGTACGAAGC GAAGATCGAT GACATCGCGC CGGGCACGTC GCACAAGGAT
CTGATCGAAG GCCGCTACAT GGTGCGCTTC GAACGGCGCA CGATCGACGA CATCCTGGCG
CTCGACGACG GCCGGGACGA CGAACTGCCG TTCCAGGTGG TGCGCCGCGT GGCCGAGATC
AACCAGCATC TCTACGATAC GTTTGCCTCG CCGTTCCTGC GCGCGATGTC GAACGAGTCG
ATGGCGGAGG TGATTCGGGC GGTGCATCCG ACGCGGCTTG AACGCTCGCT GGAAGGTGAC
ACCAATCCGT GGATGCAATG GGTGAGCGCG ATGGCGCCGG CCGTGCGCGA AGCGCGCCAG
CCCGTGTCAC CCGACAACCC GTTCCTGGCC ATGCAGACCG CGATTTCCGA CCAGATCGTG
CGCTCGCTCG ACCTGTACCG CGATATGCGC GATGCCTGGC AGGAACAGGC GTTCTCGTCG
ATCTACGCCA CGCCGTGGCT GCCGGCCCTG TTCGGCATGA AGGTGGATAC CGAGCGCGCC
GAGTCGCCCG CCGTTAGCGC GCTGCGCACG GAGGTGGCGG AACTTCGCCG TCGCGAGGCG
CTGTCCCGGA TCGGCGAGGG CACGCTGGTC GATGGATTCC TGCGTATCCT GGCCTACGTG
ACGGCGGGCA AGTCCGCCAT CGAGGAACGT CCATTCAACC TGCTACGCAA GCTGGCGGTG
GAAAACCCGC CCGACGAGCG TTTCACGCTG GCCGAGTTCA AGGACGCGGT ACGGCGTCAG
AGCTATGTAG TCAGTCTCGA CCCCGAGGCC GCGCTGCGCA CGCTGCCACA ACTCGTGCCG
GACATGAAGG AGCGCCGCCG GGTGATGGTG CTGGCGCATC GCGTGCTGAC TGTCGGTGGC
CCGCTCGAGG GCGAGTGGAT GGAGCGTTAT CGCAAGGTCG CTGACGTGAT GGGTACCGAT
CACGGCAAGG CCACGCGCGA GGCGGACGCC GACGCCAAGA CCTGA
|
|---|
| Protein sequence | MTARQPTAVT STAEAPSPAA TALAGFLPPV PPTAIAHAAW EYGLDAWQRS ILFLDILRQR
GNETAEHERG GMPPVLVFDY EVLIDGRDLP TPVNYALVRI VPPEGQPTDP AKRPFVVMDP
RAGHGPGIGG FKSDSEIGNA LRSGHPCYFI TFFRDPCPGQ TIEDVARTEG LFLQAVAERH
PDAPGKPFVV GNCQAGWALL MLAAAAPEVT GPILLAGAPV AYWSGVRGKN PMRYSGGLLG
GTWLASLAAD LGNGRFDGAW LVQNFEKLDP ANTFWSKLYN VYAKADTEGP RFLEFERWWG
GHFLMNRGEI DWIVQNLFVG NHLTAGEVRS NDGKTVIDLR NVRSPVIVFA SWGDNITPPQ
QALNWIPDLY ANVDEIVAND QTIVYCLHPS IGHLGIFVSG SVANKEHSEL FCALDLIDVL
PPGLYEAKID DIAPGTSHKD LIEGRYMVRF ERRTIDDILA LDDGRDDELP FQVVRRVAEI
NQHLYDTFAS PFLRAMSNES MAEVIRAVHP TRLERSLEGD TNPWMQWVSA MAPAVREARQ
PVSPDNPFLA MQTAISDQIV RSLDLYRDMR DAWQEQAFSS IYATPWLPAL FGMKVDTERA
ESPAVSALRT EVAELRRREA LSRIGEGTLV DGFLRILAYV TAGKSAIEER PFNLLRKLAV
ENPPDERFTL AEFKDAVRRQ SYVVSLDPEA ALRTLPQLVP DMKERRRVMV LAHRVLTVGG
PLEGEWMERY RKVADVMGTD HGKATREADA DAKT
|
|---|
| |