Gene Rmet_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0501 
Symbolpgk 
ID4037290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp530997 
End bp532253 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content65% 
IMG OID637975876 
Productphosphoglycerate kinase 
Protein accessionYP_582656 
Protein GI94309446 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTTT TCCCGATTTC CACGGGCGGC GCATGTCGCC CACGTCCCGC TCTTATCGCC 
ATGACCTCTG TCCTGCGTCT TACCGATCTC ATTTCCCAAG GCAAAATCTC CGGCAAACGT
GTGTTCATCC GTGCCGACCT GAACGTGCCG CAAGACGACG CAGGCAATAT CACCGAAGAC
ACCCGCATCC GCGCGTCGGT GCCGGCCATT CAGGCCTGCC TGGAAGCCGG CGCGACCGTC
ATGGTGACGT CGCACCTGGG CCGTCCGACC GAGGGCGAGT TCAAGCCGGA GGATTCGCTG
GCACCGATTG CCACGCGCCT GTCCGAACTG CTCGGCAAGC CGGTGAAACT GGTCCAGAAC
TGGGTCGACG GTGTCGAGGT GGCGCCTGGC CAGATCGTGC TCCTGGAAAA CTGCCGCGTG
AACAAGGGCG AGAAGAAGAA CAGCGACGAG CTGGCCCAGA AGATGGCCAA GCTCTGTGAC
GTCTACGTGA ACGACGCGTT CGGCACCGCC CACCGCGCCG AGGCCACCAC TCACGGTATC
GCCAAGTTTG CCCCGATCGC CTGCGCCGGC CCGCTGCTGG CCGCCGAGAT CGACGCGCTG
GGCCGCGCGC TGGGCCAGCC GGCGCGTCCG CTGGTGGCCA TCGTGGCCGG CTCGAAGGTT
TCGACCAAGC TCACCATCCT GAAGGCACTG GCCGACAAGG TGGACAACCT GATCGTCGGC
GGCGGCATCG CCAACACGTT CATGCTGGCC GCTGGCCTGA AGATCGGCAA GTCGCTCGCC
GAGGCCGACC TCGTGGGTGA CGCCAAGACG ATCATCGACA TCATGGCCGC GCGCGGCGCA
TCGGTGCCGA TTCCCGTCGA CGTGGTCTGC GCCAAGGAGT TCAGCGCCAC GGCTGCGGCG
ACGGTCAAGG ACGTCAAGGA CGTTACCGAC GACGACATGA TCCTCGACAT CGGCCCGAAG
ACCGCCGCGA TGCTGGCCGA CCAGCTCAAG GCTGCCGGCA CGATCGTCTG GAACGGTCCG
GTCGGCGTGT TCGAATTCGA TCAGTTCGGC AACGGTACCA AGGTGCTGGC CGAAGCCATC
GCCACGTCGA AGGCATTCTC GATTGCAGGT GGCGGCGACA CGCTGGCCGC CATCGCCAAG
TACGGCATCG CCGATCGCGT CGGGTATATC TCGACCGGTG GCGGCGCCTT CCTGGAATTC
CTGGAAGGCA AGAAGCTGCC CGCATTCGAA GTGCTGGAAC AGCGCGCCGC AGGCTGA
 
Protein sequence
MPVFPISTGG ACRPRPALIA MTSVLRLTDL ISQGKISGKR VFIRADLNVP QDDAGNITED 
TRIRASVPAI QACLEAGATV MVTSHLGRPT EGEFKPEDSL APIATRLSEL LGKPVKLVQN
WVDGVEVAPG QIVLLENCRV NKGEKKNSDE LAQKMAKLCD VYVNDAFGTA HRAEATTHGI
AKFAPIACAG PLLAAEIDAL GRALGQPARP LVAIVAGSKV STKLTILKAL ADKVDNLIVG
GGIANTFMLA AGLKIGKSLA EADLVGDAKT IIDIMAARGA SVPIPVDVVC AKEFSATAAA
TVKDVKDVTD DDMILDIGPK TAAMLADQLK AAGTIVWNGP VGVFEFDQFG NGTKVLAEAI
ATSKAFSIAG GGDTLAAIAK YGIADRVGYI STGGGAFLEF LEGKKLPAFE VLEQRAAG