| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0460 |
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| Symbol | |
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| ID | 4037248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 488468 |
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| End bp | 490126 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637975834 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_582615 |
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| Protein GI | 94309405 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.362513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGC GCAAGGCGGG GAGGTCAGAC AACGCTCGCG AGGCAACCGG CAACGACGCG
GAAATGGGCG AGGGCTGTCC GCTGCACTGG TTCGATGCGG ACCTTGGCGC GTTCGACGAC
CTGGAGCGGC GCGTTGCCGA GCATCCCGCG GACTTCTTTG CCGGCCAGGA CTTCGATCCG
GTTGGTGCCT GCGCGACGCG CGAGGCGTCC TTTGCCTCGG TCCAGATACC GGAAGATCCG
ACCGCGCCGC AGCAACACGC GGATCATCTG CTCAACGATG TGTTCCGGCA TGTGATGCCC
GTGGCGTCGC CAACGTTCGT CGGTCACATG ACGTCGTCGC TGCCATCGTT CATGCCGTCG
CTGGCCAAGA TCGTGGCGGC GCTGAACCAG AACGTGGTCA AGCTTGAAAC GTCGGGTGCA
TTGACGGGAC TGGAGCGTCA GGTAATCGGG ATGCTGCATC ACCTGGTCTT TGCGCGGGAC
GACGCGTTCT ACGCGCAATG GCTGCACAAT GCCGAGCATT CTCTCGGAGC ATTCTGCTCG
GGCGGCACCA CGGCCAATCT CACCGCGCTC TGGGCCAGCC GCAACAACAC GCTGCGCGCG
CGCGACGGCT TCGCGGGCAT CAACCAGGCG GGGCTGGTAG CGGCGTTGCG GCACTACGGA
TACGCAGGGC TGGCGATCGT CGTGTCGGAG CGCGGCCATT ATTCGCTGCG AAAGGCGGCG
GATATCCTCG GTATCGGCCG CGAGAATCTG GTGCCGGTAG GCGTCGATGA AGACGGGCGG
ATGCGCGTCG ACCTGTTGCG CGACACATTA CGCGATCTTC AACAACGCAA CATCCGGACA
GTGGCGATTG TCGGTATCGC TGGCACCACT GAGACTGGTG CGGTGGACCC GCTCGATGCC
ATTGCCGATG TGGCGCAGGA GATCGGCTGC CACTTTCATG TGGACGCCGC GTGGGGGGGT
GCCACACTGC TCTCCGCACG CGAGCGCGCG CGCTTTGCCG GGATCGAGCG CGCGGATTCG
GTCGTCATCG ACGCGCACAA GCAGTTCTAT GTGCCGATGG GCGCCGGCAT GGTGTTGTTC
CGCGATCCGG CGTGGACGCA GGACATCATC CAGCACGCAA ACTACATCGT GCGGAAGGGC
TCGGTGGACC TGGGGCGCCA TACGCTCGAA GGGTCCCGCG GTTCGGCGGC CGTCATGCTC
TATGCGAACC TGCACCTGCT TGGCCGCAAG GGGCTGGCGA AGCTGATCGA TACGGGCATC
GACAACGCGA AGTACTTCGC GTCGTTGATC GAACAGCAGC CCGACTTCGA ACTGGACAGC
CGGCCGCAGC TTTGCATCCT CACCTATCGC TACGTGCCGG CGCCGGTGCG AGCGGCGTTG
CTTTCGGCCT CGCCCGAACA GCGCGAACAA CTGCTCGAGG CGCTCGACGC GCTGACCATC
AACATCCAGG AAATGCAGCG CGACGCAGGC CGCTCGTTCG TGTCGCGGAC GCAGTTGACG
TCCTCCCAGT GGGGCGGGCG TCCGATCGCG GTGTTTCGTG TGGTGCTGGC GAATCCCGAT
ACGACGCACG AGATCCTGCA GAGCCTTCTG GAAGAGCAGC GTGGGCTGGC AAAACAGAGT
CCGATGCTGC CTGCGTTGAT GGCGATGGTT GGCGGTTAA
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| Protein sequence | MKARKAGRSD NAREATGNDA EMGEGCPLHW FDADLGAFDD LERRVAEHPA DFFAGQDFDP
VGACATREAS FASVQIPEDP TAPQQHADHL LNDVFRHVMP VASPTFVGHM TSSLPSFMPS
LAKIVAALNQ NVVKLETSGA LTGLERQVIG MLHHLVFARD DAFYAQWLHN AEHSLGAFCS
GGTTANLTAL WASRNNTLRA RDGFAGINQA GLVAALRHYG YAGLAIVVSE RGHYSLRKAA
DILGIGRENL VPVGVDEDGR MRVDLLRDTL RDLQQRNIRT VAIVGIAGTT ETGAVDPLDA
IADVAQEIGC HFHVDAAWGG ATLLSARERA RFAGIERADS VVIDAHKQFY VPMGAGMVLF
RDPAWTQDII QHANYIVRKG SVDLGRHTLE GSRGSAAVML YANLHLLGRK GLAKLIDTGI
DNAKYFASLI EQQPDFELDS RPQLCILTYR YVPAPVRAAL LSASPEQREQ LLEALDALTI
NIQEMQRDAG RSFVSRTQLT SSQWGGRPIA VFRVVLANPD TTHEILQSLL EEQRGLAKQS
PMLPALMAMV GG
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