Gene Rmet_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0413 
Symbol 
ID4037201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp439120 
End bp439614 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content64% 
IMG OID637975787 
Producthypothetical protein 
Protein accessionYP_582568 
Protein GI94309358 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00223609 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0324489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTTT CGAAGAAGAA AGGCCTGTCC ATCGACACCC TGATCGGGCT GGGTGCCACG 
ATCGAGGGCG ATGTTACGTT TTCCGGGGGG CTTCGTCTCG ATGGTCGGGT GCGTGGCAAC
GTGATAGCTG CCGAAGGCAA GTCGAGCATG CTCGTGATCA GCGAGAAGGG GCTTGTCGAG
GGCGAGATCC GTGTGGACCA CCTGATCCTG AACGGCACCG TGACCGGTCC GGTGCATGCT
GCGGAGTTGC TCGAACTGCA GCCGCACGCG CGGGTGTATG GAGAGGTGCG CTACGCAGCG
CTCGAAATGC ATCAGGGCGC AATCGTCGAA GGTCGTCTTG TGCCGCTGAC GCAAACCGAG
GTGAGGGCGC TGCCGAACCT CGCTCCGTCC GCGGAAGCCA AGACTGACGC GCCGGCCAAT
GATGGCGAGG CGACGGCGTC GGACCAGGCA GCCGATAACG ACAAGGCGCC GGAAGGCGCG
GGCGTGCCGG CCTGA
 
Protein sequence
MLFSKKKGLS IDTLIGLGAT IEGDVTFSGG LRLDGRVRGN VIAAEGKSSM LVISEKGLVE 
GEIRVDHLIL NGTVTGPVHA AELLELQPHA RVYGEVRYAA LEMHQGAIVE GRLVPLTQTE
VRALPNLAPS AEAKTDAPAN DGEATASDQA ADNDKAPEGA GVPA