| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0330 |
|---|
| Symbol | |
|---|
| ID | 4037117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 348659 |
|---|
| End bp | 349723 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637975704 |
|---|
| Product | bile acid:sodium symporter |
|---|
| Protein accession | YP_582485 |
|---|
| Protein GI | 94309275 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0798] Arsenite efflux pump ACR3 and related permeases |
|---|
| TIGRFAM ID | [TIGR00832] arsenical-resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.767923 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGG CACAAAGGAC GGCAGGAGCC TCCCAACCCA GTGCCATCGG CTTCTTCGAG
CGCTATCTGA CGGTCTGGGT GGCGCTTTGC ATCGTGGCCG GCATCCTGCT CGGCCAATGG
CTGCCAGCGG CGTTCCACAC CATCGGCGCC ATGGAAATCG CTCAGGTGAA CCTGCCGGTC
GGCATCCTGA TCTGGATCAT GATCATTCCG ATGCTGATCA AGATCGATTT CGGCGCGATG
GGCCAGGTGG CGGGCCACTG GCGCGGCATC GGCGTGACGC TCTTCGTGAA CTGGCTCGTC
AAGCCGTTCT CGATGGCATT GCTGGGCTGG ATCTTCGTGC GCCATCTGTT TGCGGGCTGG
CTGCCGGCGG ACCAGCTCGA CAGCTACATC GCCGGCCTGA TCCTGTTGGC GGCTGCGCCT
TGCACGGCGA TGGTGTTTGT CTGGTCCCAG CTCTGCAAGG GCGATCCGTA CTTCACGCTT
TCGCAGGTGG CACTCAATGA CGCGATCATG GTCGTGGCCT TCGCGCCTGT CGTCGCGCTG
CTGCTGGGCC TGTCGTCGAT TACCGTGCCG TGGGATACGC TGATGACCTC GGTTGCGCTC
TACATTGTCG TGCCGGTGCT GATCGCGCAG GTCATCCGGA AGGTATTGCT GGTGCGAGGC
GACGCTACGT ACAAGCGTGT GGTCGGCGCA CTCGGCCCCT ACTCGATCAC CGCGCTGCTC
GCAACGTTGG TGCTGTTGTT CGGCTTCCAG GGGAATGCCA TCGTCGAACA ACCGCTGATC
ATCCTTCTGC TGGCCGTACC GATCCTGATC CAGGTCTTGT TGAACTCCGG CCTGGCCTAC
TTGCTCAACC GCAAGCTCGG CGTAGCGCAC TGCGTGGCCG GCCCGTCGGC GCTGATTGGC
GCAAGCAACT TCTTCGAACT GGCCGTGGCG ACCGCGATCA GCCTGTTCGG CTTCCAATCC
GGCGCGGCGC TGGCCACCGT CGTCGGCGTG CTGATCGAAG TGCCGGTGAT GCTCTTCGTA
GTGGGCGTCG TGAACCGCTC GCAGCACTGG TACGAATCGC ACTGA
|
|---|
| Protein sequence | MSTAQRTAGA SQPSAIGFFE RYLTVWVALC IVAGILLGQW LPAAFHTIGA MEIAQVNLPV
GILIWIMIIP MLIKIDFGAM GQVAGHWRGI GVTLFVNWLV KPFSMALLGW IFVRHLFAGW
LPADQLDSYI AGLILLAAAP CTAMVFVWSQ LCKGDPYFTL SQVALNDAIM VVAFAPVVAL
LLGLSSITVP WDTLMTSVAL YIVVPVLIAQ VIRKVLLVRG DATYKRVVGA LGPYSITALL
ATLVLLFGFQ GNAIVEQPLI ILLLAVPILI QVLLNSGLAY LLNRKLGVAH CVAGPSALIG
ASNFFELAVA TAISLFGFQS GAALATVVGV LIEVPVMLFV VGVVNRSQHW YESH
|
|---|
| |