Gene Rmet_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0109 
Symbol 
ID4036893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp116409 
End bp117068 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content61% 
IMG OID637975481 
ProductDSBA oxidoreductase 
Protein accessionYP_582264 
Protein GI94309054 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CCATCGACTT CTACTTCGAT TTCTCCTCGC CCTATGGCTA CTTCGCCAGC 
ACGCGCATCG ACGATATTGC CCAGAAGTAC GGCCGCTATG TGATCTGGCA TCCGATCCTG
CTCGGCGTGG TGTTCAAGAC AACCGGCTCG TCGCCGCTTC CCAGCATTCC GCTCAAGGGC
GATTACTGCT GGCGTGATTT CGAGCGGACC TCGGAATTCA ACCATATCGA CTACAAGCGG
CCCACGCATT TCCCACTGCC GACGCGACAT GCAGCGCGCG CGATGCTATG GCTGCAGAAC
AACCACGGTG CGGATGTGGC CACGGCGTTT GCCAAGGCCG TGTATCGCGC GCTGTTTGTC
GACGACATCA ACATTGCCGA ACCCGCCGAA CTGGCGAAGC TGGCCGAGCC GCTCGGCGTC
GACCCGATCG CCATGAACGA AGGTGCCAAC AACTACCAGA TCAAGGACCA GCTCAAGGCC
GAGATCGACG TGGCGATGGC CAAGGGTGTG TTCGGCTCGC CGTTCGTGAT CGTCGACGGC
GAACCGTTCT GGGGCTTCGA CCGCTTCGAC CAGGTCGAAG CCTATCTGAA GAGCCGGCGG
CAGACCGAAC TGCGCGCCGT CGGCGGTAAC GAACTCAACA AGGAAAAGAA ACCCGCATGA
 
Protein sequence
MTAPIDFYFD FSSPYGYFAS TRIDDIAQKY GRYVIWHPIL LGVVFKTTGS SPLPSIPLKG 
DYCWRDFERT SEFNHIDYKR PTHFPLPTRH AARAMLWLQN NHGADVATAF AKAVYRALFV
DDINIAEPAE LAKLAEPLGV DPIAMNEGAN NYQIKDQLKA EIDVAMAKGV FGSPFVIVDG
EPFWGFDRFD QVEAYLKSRR QTELRAVGGN ELNKEKKPA