Gene Rmet_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0104 
SymbolaceK 
ID4036888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp110726 
End bp112549 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content61% 
IMG OID637975476 
Productbifunctional isocitrate dehydrogenase kinase/phosphatase protein 
Protein accessionYP_582259 
Protein GI94309049 
COG category[T] Signal transduction mechanisms 
COG ID[COG4579] Isocitrate dehydrogenase kinase/phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACT TCCCCAAGCT GCTCTCGTCG CAGATTGCCT ACGATGTGGC GCGGACCATG 
CTGGATGGCT TCGACAAGCA CTACCGGCTG TTCCGCGAAG TCAGTATCGA GGCCAAGGCG
CGCTTCGAGG TCGGTGACTG GCATGGTCTG CAGCAACTGC AGCGGGACCG CATCGCGTTC
TACAACCAGC GCGTGCACGA AACCATCGTG ACGCTCCAGG ACGAGTACGA CGCGGAGGAC
ATCGAGGACG AGATCTGGCA GCAGATCAAG CTGCACTACA TCGGCCTGCT GACGAACCAT
CATCAGCCCG AACTGGCCGA GACGTTCTTC AACTCGGTCT TCACGCGTAT CCAGCACCGC
TCGTACTTCA ACAACGATTT CATCTTCGTG CGTCCCGCGA TCTCGACCGA GTACATCGAG
AACGAGGAGT CGCCGATCAA GCCGACCTAC CGCGCCTACT ACCCGGGCAG CCGCGAGGGC
ATGGCGGCCT GCTTCGAGCG GATCGTGAAC AACTTTCAGC TCGAGCGTCC GTTCGAGGAT
CTCAAGCGGG ATGCCGGCTA TGTGGCCCGC GCGATCACCG AGCACTTCGG CGAATTCCGC
ATTGCGCCGA ATTTCCAGGT GCATACGCTG TCGTCGCTGT TCTTCCGCAA CAAGACTGCG
TTCGTCATCG GCCGGGTGAT CAACGGCGAC CATACCTATC CGCTGGTGGT GCCGATCATT
CACGCGGCAT CTGGCAAGCT CGTGCTGGAC ACGGTGCTGC TGCACCGGGA GCAGATCCTG
ATCCTGTTCT CGTTCGCGCA CGCCTACTTC ATGGTCGACA TGGAGATCCC GTCGGCCTAC
GTGACTTTCC TGCGAGACCT GCTGCCGCGC AAGTCGCGCG CGGAGATCTA CACCTCGCTG
GGTTTGCAGA AGCAGGGCAA GAACCTGTTC TATCGCGACT TCCTGCATCA TCTGCAGCAT
TCGTCGGATA AATTCATCAG CGCGCCGGGC ATCAAGGGGC TGGTGATGCT GGTGTTCACG
CTGCCGTCGT TCCCATACGT GTTCAAGGTG ATCCGCGATT TCTTCCCGGC GCCGAAGGAA
ACCACGCGCG AACTGGTGAA ATCGAAATAC CAGCTCGTCA AGCAGCATGA CCGCGTGGGC
CGCATGGCCG ATACGCTCGA GTACTCCGAT GTGGCGTTCC CGCTGTCCCG CTTCGACGAC
GCGCTGGTGC GCGAGCTGGA GCAGCACGCG CCGTCGATGA TCGAGTACCA GCGCAGCAAG
CAGGGCGAGG ACGAGATCGT CGTGCGCCAT GTCTATATCG AACGCCGCAT GACGCCGCTG
AACATCTGGC TTCAGGAGGG AACGGACGAG CAGGTGGATC ACGGCATCCT CGAATACGGC
AACGCCGTCA AGGAACTGAT CGCCGCGAAC ATCTTCCCCG GCGACATGCT TTACAAGAAC
TTCGGCGTAA CCCGCCACGG CCGCGTGGTC TTCTACGACT ACGACGAGAT CGAGTACCTG
ACCGACTGCA ACGTCCGCCG CGTACCCGCC CCGCGCAACG AGGAAGAGGA AATGTCCGGC
GAGGTGTGGT ACACCGTACG TCCGCACGAC ATTTTTCCGG AGACCTACGG CACATTCCTG
CTGGGCGATC CGCGTGTGCG CGCCGCCTTC ATGCGGCATC ACCCCGATTT CTTTGACGCT
GCGATGTGGC AGCACCACAA AGACCGGCTC CTGGCCGGCC ATGTCCATGA CTTTTTTGCG
TACCACAGCC AAGAACGCTT CATCCACCGC TACGGGTCCG GCGCAACCGG CCCCGCAACT
GAAGAACCAA GGAGGGCAGC ATGA
 
Protein sequence
MSHFPKLLSS QIAYDVARTM LDGFDKHYRL FREVSIEAKA RFEVGDWHGL QQLQRDRIAF 
YNQRVHETIV TLQDEYDAED IEDEIWQQIK LHYIGLLTNH HQPELAETFF NSVFTRIQHR
SYFNNDFIFV RPAISTEYIE NEESPIKPTY RAYYPGSREG MAACFERIVN NFQLERPFED
LKRDAGYVAR AITEHFGEFR IAPNFQVHTL SSLFFRNKTA FVIGRVINGD HTYPLVVPII
HAASGKLVLD TVLLHREQIL ILFSFAHAYF MVDMEIPSAY VTFLRDLLPR KSRAEIYTSL
GLQKQGKNLF YRDFLHHLQH SSDKFISAPG IKGLVMLVFT LPSFPYVFKV IRDFFPAPKE
TTRELVKSKY QLVKQHDRVG RMADTLEYSD VAFPLSRFDD ALVRELEQHA PSMIEYQRSK
QGEDEIVVRH VYIERRMTPL NIWLQEGTDE QVDHGILEYG NAVKELIAAN IFPGDMLYKN
FGVTRHGRVV FYDYDEIEYL TDCNVRRVPA PRNEEEEMSG EVWYTVRPHD IFPETYGTFL
LGDPRVRAAF MRHHPDFFDA AMWQHHKDRL LAGHVHDFFA YHSQERFIHR YGSGATGPAT
EEPRRAA