| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0103 |
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| Symbol | |
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| ID | 4036887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 109418 |
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| End bp | 110599 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975475 |
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| Product | isovaleryl-CoA dehydrogenase |
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| Protein accession | YP_582258 |
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| Protein GI | 94309048 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC TACCCGGCCT GAAATTCGAC CTTGGCGAAG ACATCGAGAT GCTGCGCGAA
TCGGTGCGCA ACTGGGCGCA GGCCGAACTG GCGCCGCGCG CCGCCGAGAT CGACCGGACC
GACCAGTTTC CGATGGATGC ATGGCGGAAG ATGGGCGACC TCGGCGTGCT GGGCATCACG
GTGGCCGAGG AGTACGGCGG CGCCAACATG GGGTACCTGG CCCACATGAT CGCGATGGAG
GAGATCAGCC GCGCGTCGGC GTCGGTCGGC CTGTCGTACG GCGCCCATTC GAACCTGTGC
GTGAACCAGA TCCACCGCAA CGGCACGGCG GCCCAGAAGG CGAAGTACCT GCCGAAGCTG
GTTTCCGGCG AATGGATCGG CGCGCTGGCC ATGAGCGAGC CGAACGCCGG ATCGGACGTG
GTCAGCATGA AGCTGCGCGC CGATTTCAAG GGTGACCGCT ACGTGCTCAA CGGCACCAAG
ATGTGGATCA CGAACGGGCC GGACTGCGAC GTGCTGGTGG TCTACGCCAA GACCGAGCCG
GACCTGGGCG CGCGCGGCAT GACCGCCTTC ATCGTCGAGA AGGGCATGAA GGGCTTCTCG
GTAGCCCAGA AGCTGGACAA GCTCGGCATG CGCGGTTCGC ACACCGGCGA ACTGGTGTTC
CAGGACGTGG AAGTGCCGGT CGAGAACATT CTCGGGGCCG AGAACGGGGG CGCCAAGGTG
CTGATGAGCG GCCTGGACTA CGAGCGCGCC GTGCTGTCGG GCGGCCCGGT CGGCATCATG
CAGGCCTGCA TGGACGTGAT CACGCCGTAC ATCCACGATC GCAAGCAGTT TGGCCAGAGC
ATCGGCGAGT TCCAGCTGAT CCAGGGCAAG GTGGCCGACA TGTACACCAC GCTGCAGGCC
GCGCGCAGCT ACCTGTACAC CGTGGGCAAG AACCTGGACT CGCTGGGCAC GGACCACGTG
CGCCAGGTCC GCAAGGACTG CGCCGCCGTG ATTCTGTACA CCGCGGAGAA GGCCACGTGG
ATGGCGGGCG AGTCGGTGCA GATCCTGGGC GGTAACGGCT ACATCAACGA ATACCCGGTC
GGCCGCCTGT GGCGTGATGC CAAGCTGTAC GAGATCGGCG CGGGCACTTC GGAGATCCGC
CGCATGCTGA TTGGCCGCGA ATTGTTCTCC GAAACGATGT AA
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| Protein sequence | MTELPGLKFD LGEDIEMLRE SVRNWAQAEL APRAAEIDRT DQFPMDAWRK MGDLGVLGIT
VAEEYGGANM GYLAHMIAME EISRASASVG LSYGAHSNLC VNQIHRNGTA AQKAKYLPKL
VSGEWIGALA MSEPNAGSDV VSMKLRADFK GDRYVLNGTK MWITNGPDCD VLVVYAKTEP
DLGARGMTAF IVEKGMKGFS VAQKLDKLGM RGSHTGELVF QDVEVPVENI LGAENGGAKV
LMSGLDYERA VLSGGPVGIM QACMDVITPY IHDRKQFGQS IGEFQLIQGK VADMYTTLQA
ARSYLYTVGK NLDSLGTDHV RQVRKDCAAV ILYTAEKATW MAGESVQILG GNGYINEYPV
GRLWRDAKLY EIGAGTSEIR RMLIGRELFS ETM
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