Gene Rmar_2796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2796 
Symbol 
ID8569467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp3248801 
End bp3250423 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003292052 
Protein GI268318333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.231871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCGCA ATAAAGCCAT GAACCGCACG CGCCTGCTGA GATGGCCAGA AAGCCTGCTC 
GTCCTGCTCA TCGCCGTGCT TCTCGCCTCG TGCGATGCGC TGAGCGACTT CGGCGACATG
AACGTCGATC CCACGCAGGC CTCCACCATC GATCCCGGCA TGCAGTTTTC CACGGTACAG
CTGGCCACAG CCGGCTCCCG CTACGAAACC TGGCGCGTCA ACCTGATCTA TGGCGAAGCT
ATCGTGCAGC ACCTGGCCCA TACCTGGTGG GCCGGCGACA AGTACACCTT CAACGAAGAC
TGGGCGACTT CGCTGTGGCG CACCGCCTAT TCAGGCGCGG GAGTGTCCTG GCGCGCCGCT
GTCAAAAACA TCGAAGACCT GAAGGCTCGT CTTGAGGAAG CGAAGGCTAA CGGAGAGTCG
GTTGACAACC TACTGGCCGC CGTACGAATC TGGCGCGTGC TGATCTACCA CCGCATTACC
GACACCTACG GGGATACGCC TTACTCCGAG GCGGGCAAAG GTTATCTGGA AGGCATTTTC
GCGCCCCGTT ACGACCCGCA GCAGGAGATC TACATGGACA TGCTGAAGGA GCTGGAAGAG
GCCGTGGCCC AGTTCGATCC ATCTCAACCC ACGTTCGGCA ACGCGGACCT CGTTTACGGG
GGGGACATCA CGAAATGGAA GAAGTTCGGC AACGCCCTCA TGCTGCGGCT GGCCATGCGG
CTGGTGAAGG TCGATCCGGC TACCGCTCAG CAGTGGGCCG TCAGGGCCAT CAACGGCGGC
GTAATGGAAA GCAACGACGA CATTGTCTAC ATGCGCCATC AGACCGGCCC CTCTACCGGA
CCGGCCGGCA TCAACACCAA TGCCAACAGC GAAGTGTTTG CCGTGGACGT TCCGCGGCTC
AGTCAGACGT TCGTTAACTG GCTTAAAGCG CATAACGACC CGCGCCTGCC TGTTCTTGGG
GCCGTCATCA AGGACGGACA GATCATAACG GATCCTTCCG TTCAGAAAGG CATGCCCAAT
GGCTACGACG CCAACACGAT CCAGAATCAC CCGAGCTGGA CGGGAAGCCT TGATGACTAT
TCGCGGGTCA ACCCGCTGCT GACCGGCCTG GACGATCCGT TTTTCTTTGT GACCTACGCC
CAGACGGCCC TGCTGCGGGC CGAAGCGGCC GTGCGTGGCT GGACGAGCGA AGATCCGGCC
ACGCTGTACG CCGAAGGCGT CCGGGCCGCC ATGAAGCAGC TGTCGCTCTA CGACGCGGGT
GGCGCGGCCG ACATCGACGA CGCGGCCATC GACGCCTACC TGGCCGCCAA TCCGCTCAGC
AGCGATCCCG ACGAAGCCCT GCGGCAGATC AACGAGCAGT ACTGGGCAGC TTCCTTCCTC
GATGGCATTG AGTCCTGGGC CAACTGGCGC CGCAGCGGCT ATCCCGTGCT GGAGCCGGCG
CCAGTCGATG ACCCCAACCC CTACCCGGGT AACGTGACCA ATGGTCAGAT TCCGCGCCGA
CTGACCTATC CGCCTTCCGA GGGCGTGCTG AACGCCGAAA ACTATCAGGA GGCCCTCAGC
CGCCAGGGGC TGCGCGGCGA TCCCAGCGAC ATGGCCGTAC CCGTCTGGTG GGACCGGCAA
TGA
 
Protein sequence
MYRNKAMNRT RLLRWPESLL VLLIAVLLAS CDALSDFGDM NVDPTQASTI DPGMQFSTVQ 
LATAGSRYET WRVNLIYGEA IVQHLAHTWW AGDKYTFNED WATSLWRTAY SGAGVSWRAA
VKNIEDLKAR LEEAKANGES VDNLLAAVRI WRVLIYHRIT DTYGDTPYSE AGKGYLEGIF
APRYDPQQEI YMDMLKELEE AVAQFDPSQP TFGNADLVYG GDITKWKKFG NALMLRLAMR
LVKVDPATAQ QWAVRAINGG VMESNDDIVY MRHQTGPSTG PAGINTNANS EVFAVDVPRL
SQTFVNWLKA HNDPRLPVLG AVIKDGQIIT DPSVQKGMPN GYDANTIQNH PSWTGSLDDY
SRVNPLLTGL DDPFFFVTYA QTALLRAEAA VRGWTSEDPA TLYAEGVRAA MKQLSLYDAG
GAADIDDAAI DAYLAANPLS SDPDEALRQI NEQYWAASFL DGIESWANWR RSGYPVLEPA
PVDDPNPYPG NVTNGQIPRR LTYPPSEGVL NAENYQEALS RQGLRGDPSD MAVPVWWDRQ