Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2761 |
Symbol | |
ID | 8569430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 3202410 |
End bp | 3204233 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | 60 kDa inner membrane insertion protein |
Protein accession | YP_003292019 |
Protein GI | 268318300 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00156277 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGACCGCA ACGTTGTCAT CGCCACGATC CTGACCGCGC TGATCATGTT CGTCTGGCTG TGGTGGCTGG CCCCACCGCC GCCACCGCCG ACGACGGCCG CGCGCGACTC GCTCCAGCAG GAGGATACCG CCGCGCAGGA AGTCATCGCT CAGGAAGAAG CTCCAACCGC TCCCGGCGCG CCGCTGCTGG CGGGCCCGTT GAACGACACG CTGCTGGCCG CCGCCCGCAA CGGCCGGGCC CGCACCATCA CGATCGAAAC CGATCTCTAC GAGGCGCAGC TCTCCACGAA AGGGGCCACG CTGGTCTCGC TGAAGCTCAA GAAATACAAA CAGTACGACT TCGAGACGCC CGTCCAGCTC GTCGATACCA CCAAACCCGG TGCGCTGAGT CTGGTCTTCA CCACACCGAC CAACCACCTG GTCGATACGC GCGCGCTGTA CTTCCGGACG GCCACGACGG CCGACACGAT CCGCGTGGCC GACGAGCCGG TCGAGGTGGC CTTCGAGGTG CCCGTCGGCG ACGGCCGCAT TCGCCAGGTT TACACGTTCC TTCCAGGCGA CTACGAGGTC CGGCTTCGCG TCGAGCAGGA GGGCGCGGCC ACCTTCAGCA CCATCGAAGG CTACGAGCTG GTCTGGAACG GTGGCGTGCC GTTCGCCGAG CGCGACCGTG ACGACGAGGC CCGGCACAGC GGCGCCTTCG CCCGCAGCGG CGGCGAGCTG GAAAAGATCA CGCTCGACGG ACAGCGCACC GAGGAAAAGC GCCTGGCCGG ACAGGTCGAC TGGGTGGCCG TCAAGAACAA GTTCTTCACG GCCGTGATGA TACCCTCCGG CGAGACCCGG GGGGCCGAGC TGGTCGGCGA GCGACTGGGC GAACCCGAAG ATCCCTCGTA CTGGGAAGAC TACGCCGCGC GGCTGTTGAT GCCCCGGCCC GAAGACGGGC AGGTGGATGA ATTCCGGCTC TACCTGGGCC CCATGGAATA CTTCCGCCTG GCTCGCTACG ATCTGGGGCT CTACGACATG GTCGATTACG GCTGGGACGC CTTCGAGTGG ATGACCCGGC CGCTGGCCAA GTTCGTCTTC ATTCCGCTCT TCACGCTGCT GGGGCGCCTG CTGGGCAACT ACGGGCTGGC CATCATCGTC TTCGCGCTGC TGGTCAAGAT CGCGCTCTAT CCGCTCACGC GGGCTTCGTT CCGCAACATG GCAAAGATGC GGGAGCTGCA GCCCGAGCTG GAGGCCATCC GCGAAAAGTA CGCGGACAAT CCCCAGAAGC AGCAGGAAGC CCTGATGAAG CTCTATCGGG AGAAGAAGAT CAATCCGCTG GGCGGATGCC TCCCGATGCT GCTGCAGTGG CCCGTGCTGA TCGCGCTCTG GCAGTACTTC CAGCAGTCGC TCATCGTGCG CCAGCAGGCC TTCCTCTGGG CGAAGGACCT CTCGGCGCCG GATCCCATCC TGCACCTTCC GTTCAAGATT CCGCTCTACG GCGACTTCGT GGCGGGCTTC ACGCTGCTGA TGGGTCTTTC CATGATCATC CAGATGCGCA TTCAGTCCGC CTCGACGCCC TCGAACCCGC AGACGAAGAT CCTGACCTAC GTCTTCCCGG TCTTTATCTT CGCGATTTTC AACCGGCTGT CCTCGGCGCT GAACCTCTAC TACCTCTGCT ACAACATCTT CTCGGCGATT CAGCAGTTCT GGATCAATCG CTCGCTGGAG AAAGAAAAAA CGAAGGCGGC GGTGGACGGG CAGGGAGATC GCCGGGCCGC GCAGAAGGCG GCCCGTAAAG CGGCCGAAGC CCGGCGCAGG AAGCAAGCCC GGACCCGTCG ATAA
|
Protein sequence | MDRNVVIATI LTALIMFVWL WWLAPPPPPP TTAARDSLQQ EDTAAQEVIA QEEAPTAPGA PLLAGPLNDT LLAAARNGRA RTITIETDLY EAQLSTKGAT LVSLKLKKYK QYDFETPVQL VDTTKPGALS LVFTTPTNHL VDTRALYFRT ATTADTIRVA DEPVEVAFEV PVGDGRIRQV YTFLPGDYEV RLRVEQEGAA TFSTIEGYEL VWNGGVPFAE RDRDDEARHS GAFARSGGEL EKITLDGQRT EEKRLAGQVD WVAVKNKFFT AVMIPSGETR GAELVGERLG EPEDPSYWED YAARLLMPRP EDGQVDEFRL YLGPMEYFRL ARYDLGLYDM VDYGWDAFEW MTRPLAKFVF IPLFTLLGRL LGNYGLAIIV FALLVKIALY PLTRASFRNM AKMRELQPEL EAIREKYADN PQKQQEALMK LYREKKINPL GGCLPMLLQW PVLIALWQYF QQSLIVRQQA FLWAKDLSAP DPILHLPFKI PLYGDFVAGF TLLMGLSMII QMRIQSASTP SNPQTKILTY VFPVFIFAIF NRLSSALNLY YLCYNIFSAI QQFWINRSLE KEKTKAAVDG QGDRRAAQKA ARKAAEARRR KQARTRR
|
| |