| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2725 |
|---|
| Symbol | |
|---|
| ID | 8569394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 3157375 |
|---|
| End bp | 3158268 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_003291984 |
|---|
| Protein GI | 268318265 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGA CCGCACTCAC TCCTTCAGAG CATATCCCGA CGCTGACCGA CCTGGAGCTG
GAGTGCCCGC CGCTTCCGCA GACGCTGCTG GAGGCCATTC AGCTTATGGA ACGACCAGAG
CCGCCCGAGC CTGAGGAAGT GGAGGCCCTG CTGCAGCATG ATCCGGCAGC GGTAGCCCGC
CTGTTGCGCG TGGCCAACTC GGCCTATTAC GGACTCCGGG GACGCATCGG CGAGGTGCAC
CATGCCATTG TCGTACTGGG GCCGCCCGCC GTGGTCGGGA TGGTCATGAG CATGGGGATG
CTCTCGATGA AGAGCGCCTT CGATGCCCGG ACGGCCGCGC CATTTCTGAA TCTGGTGCGC
CATTGCGCGG CCACCGCCTA CCTGGCCCGT TTGCTCATTC AGCGCGCACC CCGGCCGGGC
GACTGGCGGC CGGAGTCGGC CTACACGGCC GGACTGCTGC ACGACTTTGC CAAACTTCTG
CTGCTTTACA ACAAGCCCGA CGCGGCACTG GCCGCCTTCC AGCCGGGTGC CGGTCCGCAT
ACGCCCGAAG AACAGGAGGC CGTCTTTGGC TACAGCCTGG AGGTGATCAC CCAGGCGCTG
GCACTGCACA TGAAGCTACC CGAGCCGCTC TTCCGGGCGC TGATGGACCT GTACGGCGAA
GGACGCGGCG ACGGCGTGGC CGCCACGCCG GGTGCCCTGC TGCGGGTGGC GAGCCTGGGC
GCTACCTGGC TGGACTACGG CTTCGACGAG CCGATGCGCA GGGAAGAAGA ACCGCTGGAC
GCCGATTGGG AGCTGACCGC CCAGCTCTTC GGCTATCCGG ATGCCGAGGC CGTCTGGCAG
ACCGTGGAAG CGGCTCGCGA AATCCTGCAG AACTACGTCG ACGCGCACTT CTGA
|
|---|
| Protein sequence | MTPTALTPSE HIPTLTDLEL ECPPLPQTLL EAIQLMERPE PPEPEEVEAL LQHDPAAVAR
LLRVANSAYY GLRGRIGEVH HAIVVLGPPA VVGMVMSMGM LSMKSAFDAR TAAPFLNLVR
HCAATAYLAR LLIQRAPRPG DWRPESAYTA GLLHDFAKLL LLYNKPDAAL AAFQPGAGPH
TPEEQEAVFG YSLEVITQAL ALHMKLPEPL FRALMDLYGE GRGDGVAATP GALLRVASLG
ATWLDYGFDE PMRREEEPLD ADWELTAQLF GYPDAEAVWQ TVEAAREILQ NYVDAHF
|
|---|
| |