Gene Rmar_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2543 
Symbol 
ID8569209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2956270 
End bp2957532 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003291807 
Protein GI268318088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCGC AGGCCCTGCT GACCGTTCCA TTTGATCGGG TGGCGACCCA CGCACGCGGG 
TTTGTGGGCT GGGTGGCCGA ACTGCTGCAG GGGCCCCTGG CCTATCAGCA TACGCTGCTG
GCTGTCTGTC CCAATTCGGA AGCGGTAACA CGGGCCGCGC TGGAGGCCGC CGCCGAGGCC
AACGCCCCGC TGCTTTTTGC CGCCACGCTG AACCAGGTGG ACCTCGACGG CGGCTACACC
GGCTGGACGC CCGCCACGCT GGCCCGGTTC GTGGCGGACG AACTGGCCCG CCTGGACCTG
CACATCCCCG TCGTGCTCGG CCTGGACCAC GGCGGCCCCT GGAAAAAGGA TCTGCACGCC
CGCAACCGAT TGTCCTTTGA GGAAACCTTC CAGGCCGTGC TGCGGGCCAT CGAGGCCTGT
CTGGATGCCG GCTACGGCCT GCTGCACCTG GATCCGACGG TCGATCTGGA GCTATCGCCC
GGCACGCCGG TGCCCATCCC GCGCATTGTC GAACGCTCGG TAGCGCTTTT GCGTCATGCC
GAAACCTATC GACTTCGACG TAACCTGCCG CCGGTCGCCT ACGAGGTGGG CACCGAAGAA
GTCGGCGGCG GCCTGCAGGC CGAAGCGCGC ATGGCGGAGT TTCTGGATCG CCTCTGGACC
GCACTGGACC GGGAAGGCCT GCCCCATCCA GTCTTCGTGG TGGGCGACAT CGGCACCCGG
CTCGACACGC GCACGTTCGA CTTCGAGCGG GCCCGACGGC TGGACGCGCT GGTGCGCCGC
TACGGTGCCC TCATCAAAGG GCACTACACC GACGACGTGG ATCGCCTCGA TCTGTACCCG
AAGGCGGGCA TCGGCGGGGC CAACGTGGGC CCGGGCCTGG CCGCCATCGA GTTTGAAGCG
CTGGAGGCGC TGGTGGAGGA AGCCCGTCGC CGCGGTCTTT CGGTGACGTT CGATCAGGCC
ATCCGCCGGG CCGTCGTCGA AAGCGGACGC TGGACGAAGT GGCTCCAACC GGAAGAGAAA
GGCCAGCCGT TCGATGCGCT GGATCCCGAG CGGCAACGCT GGCTGGTGGC CACCGGCAGC
CGCTACGTGT GGACGCATCC GGCCGTCCTG CAGGCCCGCC GCGAACTCTA CGAGGCGCTC
GCCCCCTGGC TCGATGCCGA CGCTTTCGTG CGCACGCGCA TCAAAGCACG CCTGATGGAC
TACTTTCGTG CCTTCAACCT GATCCATTTC AACGAGCGGC TGCAGGCCTT TCTCCCCGAA
TGA
 
Protein sequence
MQAQALLTVP FDRVATHARG FVGWVAELLQ GPLAYQHTLL AVCPNSEAVT RAALEAAAEA 
NAPLLFAATL NQVDLDGGYT GWTPATLARF VADELARLDL HIPVVLGLDH GGPWKKDLHA
RNRLSFEETF QAVLRAIEAC LDAGYGLLHL DPTVDLELSP GTPVPIPRIV ERSVALLRHA
ETYRLRRNLP PVAYEVGTEE VGGGLQAEAR MAEFLDRLWT ALDREGLPHP VFVVGDIGTR
LDTRTFDFER ARRLDALVRR YGALIKGHYT DDVDRLDLYP KAGIGGANVG PGLAAIEFEA
LEALVEEARR RGLSVTFDQA IRRAVVESGR WTKWLQPEEK GQPFDALDPE RQRWLVATGS
RYVWTHPAVL QARRELYEAL APWLDADAFV RTRIKARLMD YFRAFNLIHF NERLQAFLPE