Gene Rmar_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2438 
Symbol 
ID8569104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2830192 
End bp2831991 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content65% 
IMG OID 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003291704 
Protein GI268317985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGGC AACGAAAAAA ATGGCGCTTC TGGCTCGATC CCGCTGGCAT CGCACTGATC 
TACTGGAGCG CAGGGCTGCT CTGGATTCTC CTGTCCGATC ACCTGCTGCT GCAGGTCGGG
GTGGACCCGG ACACGCTCAC GCGCTGGCAG ACGGCCAAAG GCGTGCTGTT TGTCACGCTT
TCAGCGCTGT TGCTCTACGG ATTGATGGAG ATGGGACACC GGCTGCTCCG GGAGCAGACC
GAGCGGCTGA AGGAATCGGA AGCGAACTAC CGGCTGCTCT TCGAACACAA CCCCCGGCCG
ATGTGGGTCT ATGATCTGGA GACGCTGCGT TTTCTGGCGG TGAACCAGGC AGCCGTTGCA
CTCTACGGCT ACAGTCCGGA AGAATTCCGG CGCATGACCA TTCTGGACAT TCGGCCGGAG
GAAGATCGGC CGAAGGTGGC TGCCAGCGCC TGGGCACCGC GTGGCCCCTT CAAACACTCG
GGCCCCTGGC GGCACCTGAC AAAAGACGGG CGATTGCTGG AGGTGGAGAT CGACTCGCAC
CTGATCGAGT GGGAGGGACG GCCGGCCGTG CTGGTACTCG TGCAGGACGT CACGGAGCGC
AACCGCATCG CCCGCGAGAA TGCCCGCTAT CGCGAGGGGT TGGAGCGCCT GCTGGAGGTC
AGCCGGCAGC TCATGGGGGA GACGACCGAC TGTGATCGAC TGCAGGCGGA GCTGGTGAAG
ACGGTCCGAC AGATCGTGCC GTCGGCCGAG GCCGTACTGC TCTGGATGCG GCGCGGCGAT
CGGTTCGTAC TGGAGCAGAA AGATGGTGGA CCCGAAACCC TGAAGCCGGG CTTTCCGCTG
CCGCTCACGG CCGATCTGGT GGCCCGCCTG GAGACCGTCG ATACGCTGGA CCCGGTCGAG
GCAGCCGCAT TGCAGGCCCG CACGGTCCCG GCCCTTCGCG ACCTGAAGGC GGCGCTGGTG
GCGCCCATCC GCACCGATCA GGGGCTGGAG GGCGTGATCT GCGCGGACAG CTTCACGCGG
GCCGATGCCT TCGCCTCCTA CGAGCGGGCC CTGCTGCAGT CGCTGGCGGC GCTGGCTTCG
GTCATGTTGC AGAACGCCCG TCTGTTTGCG CAATTGCGCC GGCTTTCCCG GCAGCTGCTG
GTGGCCCACG AAGAAGAACG CCGCCGCATC GCCCGCGAGC TGCACGACGA GGTGGGGGCC
CTGCTGACGT CGGCGCAACT CTGCCTGGGG ATGGCGCAGA CGGACGTGTC GGAAACGCAG
CAGACGCTGG CGCAGAACCT GCAGGAAGCC CGCGCGCTGA TCGACCGACT CAGCCAGGAA
ATTCGCCAGC TCACGCTTCA GCTTCGCCCG CCGCTGCTTG ACGAGCTGGG ACTGGTGGGG
GCGCTGCAGG CTTACATCGA GCGCTACCAG AAACAGACGG GCATCCGGGT GCACCTGCAC
ACCGAGCTGG AGCCCGAGCT TCGCCTGCCG GAGCTGATCG AGTTGACGGC CTACCGCTTC
GTGCAGGAAG CGCTGACCAA CGTGGCCCGG CATGCGCAGA CCGAGGAAGT TGCCGTGCAG
CTCCGGCTTA CCGATCGGGA ACTTCTGCTG GTCGTCGAAG ATCAGGGAGT GGGGTTCGAC
CCCGAACAGG CTTTTGCCAC CGGACGATCC ATGGGACTAA CGGCCATGCG AGAACGGATC
GAATTGCTGG GTGGTCGGTT AGAAATTGCA AGTCAACCCG GACAGGGTAC CCGCCTGAAG
GCCCTGTTGC CACTTCCGGA AGAAGCCGAT CGTCTGATCT CAACCGAAGT ATCGCGATGA
 
Protein sequence
MRRQRKKWRF WLDPAGIALI YWSAGLLWIL LSDHLLLQVG VDPDTLTRWQ TAKGVLFVTL 
SALLLYGLME MGHRLLREQT ERLKESEANY RLLFEHNPRP MWVYDLETLR FLAVNQAAVA
LYGYSPEEFR RMTILDIRPE EDRPKVAASA WAPRGPFKHS GPWRHLTKDG RLLEVEIDSH
LIEWEGRPAV LVLVQDVTER NRIARENARY REGLERLLEV SRQLMGETTD CDRLQAELVK
TVRQIVPSAE AVLLWMRRGD RFVLEQKDGG PETLKPGFPL PLTADLVARL ETVDTLDPVE
AAALQARTVP ALRDLKAALV APIRTDQGLE GVICADSFTR ADAFASYERA LLQSLAALAS
VMLQNARLFA QLRRLSRQLL VAHEEERRRI ARELHDEVGA LLTSAQLCLG MAQTDVSETQ
QTLAQNLQEA RALIDRLSQE IRQLTLQLRP PLLDELGLVG ALQAYIERYQ KQTGIRVHLH
TELEPELRLP ELIELTAYRF VQEALTNVAR HAQTEEVAVQ LRLTDRELLL VVEDQGVGFD
PEQAFATGRS MGLTAMRERI ELLGGRLEIA SQPGQGTRLK ALLPLPEEAD RLISTEVSR