Gene Rmar_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2407 
Symbol 
ID8569072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2793269 
End bp2794027 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content65% 
IMG OID 
ProductATP-dependent Clp protease, proteolytic subunit ClpP 
Protein accessionYP_003291673 
Protein GI268317954 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.428709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACC GTAAGCTTGT AGAGGATTTT CTGAAGTTCT CGCGGAGCCT GACGCTCCCC 
TCCGGGATCT ACAGCGGGCC GTTCCAGCAG TATCCGGTCG GCGCGCTGGT TCCCATCGTG
ATCGAGCAGA CCACGCGCGG GGAGCGTGCC TACGACATCT TCAGCCGCCT GCTCAAGGAG
CGGATCGTGA TCATCGGCAC GCCGATCAAC GACCAGATCG CCAACCTGGT CGTGGCCCAG
CTGCTCTGGC TGGCCAGCGA GGACTCGGAG CGTGACATCA ACATCTACAT CAACTCGCCG
GGCGGCTCCA TCGACAGCGG CCTGGCCGTC TACGACACGA TGCAGTACGT GGCCCCGCCG
GTGGCCACGA TCTGCGTGGG GCTGGCCGCC TCGATGGGCG CCGTGCTGCT GGCGGCCGGT
GTCAAGGGCA AGCGGGCGGC TCTGCCCAAC TCCCGCATCA TGATCCACCA GCCCTGGATG
AGCGGCGTGC AGGGCCAGGC GACCGACATT GAGATTCACG CCCGCGAGAT CCTCAAGATG
CGGGAACGGC TGAACGAGAT CCTGGCCTAC CACACGGGCC AGCCCAAGGA GCGGATCGCC
CAGGATGTCG ATCGCGACTT CTGGCTCAGC GCTCAGGAAG CCAAAGAGTA CGGCCTGGTC
GACAACGTGC TCACGCCACG ACGCGGCTTC TTCCCGTCGC CGGACGGCCA GGCTTCGAGC
GACAAGGACA GAGGAAAAGA CAAAGACAAG GACGCGTAG
 
Protein sequence
MSDRKLVEDF LKFSRSLTLP SGIYSGPFQQ YPVGALVPIV IEQTTRGERA YDIFSRLLKE 
RIVIIGTPIN DQIANLVVAQ LLWLASEDSE RDINIYINSP GGSIDSGLAV YDTMQYVAPP
VATICVGLAA SMGAVLLAAG VKGKRAALPN SRIMIHQPWM SGVQGQATDI EIHAREILKM
RERLNEILAY HTGQPKERIA QDVDRDFWLS AQEAKEYGLV DNVLTPRRGF FPSPDGQASS
DKDRGKDKDK DA