| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2388 |
|---|
| Symbol | |
|---|
| ID | 8569053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2764237 |
|---|
| End bp | 2765892 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | SSS sodium solute transporter superfamily |
|---|
| Protein accession | YP_003291654 |
|---|
| Protein GI | 268317935 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCTT TTGAATTTGC CTGGCTCGAT CTGGCCGCCG TCGGCCTCTA CGTGGTCTTC
ATCGTCTGGC TGGGGCTCTA CCTGGCCCGC CGCATGGAAA CGGCCGACGA TTACTTCCTG
GCCGGTCGCT CGCTTACCTG GTGGCTGATC GGCTTTTCGC TGTTCGCCTC GAACGTGTCT
TCCAGCACGC TGCTCGGACT GGCCTCGAGC GCCTACGGCA CGGGCATCTC GGTCTACAAC
TACGAGTGGA TGGCCACGCT CGTGCTCATC TTTTTCGTGA TCTTCATTCT GCCGTTCTAC
CTGCGCACGC GCATCTACAC GATCCCGGAA TTTCTGGAGC GGCGCTTCGA CGGGCGCGCC
CGCGTGTACT TTTCCGGGCT GCTCATCGTA CTCAACATCA TGGTGGACAC GGCCGGGGCG
CTGTACGCCG GGGCGCTGGT CGTGCAGATC CTCTACCCGC AGGTGCCCAT GTGGCTGGCG
GTGGCCGTGC TTGGCCTGCT GGCCGGACTC TACACGGTGG CGGGCGGCCT GAAGGCCGTC
GTCTACACCG ACGCCGTGCA GGCCGTGCTG CTGTTGCTGG GGGCCGTGCT GGTGGCCGTG
CTCTCGTTCA AGGCGGTGGG TTCCTGGGAA GTGGTCGAAG CACAGATCCC GGTGGGCGAC
CTGAGCATCA TCCGCCCGGC CGACGATCCG GTGCTGCCGT GGCCGGGGCT GGTGACGGGC
GTCTTTCTGC TGGGCTTCTA TTTCTGGTGC ACGAACCAGT TCATGGTGCA ACGCGTGCTG
GGCGCGCGCG ACCTGAACCA CGGCCGCTGG GGTTCGCTCT TTGCCGGACT GCTGAAGCTG
CCCGTGCTGT TCATCATGGT ACTGCCGGGC ATTTTCGCCC GCATCCTGTA TCCGCCCGAG
CAGTATCCCA TGCTGGCGGC CAACACGGAC CTGGTCTTTC CGACGCTGCT GTTCGATCTG
CTTCCGGCGG GTATCCGCGG GCTGGTGATC ACGGCGCTGG TGGCCGCCAT CATGTCGAGC
GTCGACTCGA CGCTGAACTC GGCCTCGACG CTCGTGACGA TGGACTTCAT TCGCCGCCTT
AAACGCCGCG ACAGCCATGA ACTGGTCGGG GCCGGACGCT GGGTGACGGT GGTCTTCATG
GCGCTGGCCA TCCTCTGGGC GCCACAGATC GTGCGTTTTC CGAACCTGTG GACCTACCTG
CAGGCCATGC TCGCCTACCT GGCGCCGCCG GTGGTGGCCT GCTTCCTGGT GGGCATCTTC
TGGAAGCGGG CCACGCGCAG CAGCGCGTTT GCCGGGCTGG TGGTGGGGCA CCTGGCCGCC
GCGGTGTTTC TGGGGCTGAA TCTGACGGAT CGGCTCATCG TGCAGACCGG ACCGCTTTCG
CCCGCGCAGC AGGCACTGGT GGCCGCCGGC GTGCCCGTGC TGCACTTTCT CTACCTGCCG
CCCATTCTGC TGGCGATCAG CGTGATCGCG ATGGTTGTGA CCAGCCTGCT CCAGCCGCCG
CCGGCACCCG AAGAGGTGGA AGGGTTGACC TGGTCGCCGG AATTCTTCCG CCAGGAGTCC
CGCGAACTGG CCGGCCTGCC CTGGTACCAG AACTACCGCA TCCAGGCGCT GGGCCTGCTC
GTGCTCATTG CATGGATTCT GATCTGGTTC CGGTGA
|
|---|
| Protein sequence | MPAFEFAWLD LAAVGLYVVF IVWLGLYLAR RMETADDYFL AGRSLTWWLI GFSLFASNVS
SSTLLGLASS AYGTGISVYN YEWMATLVLI FFVIFILPFY LRTRIYTIPE FLERRFDGRA
RVYFSGLLIV LNIMVDTAGA LYAGALVVQI LYPQVPMWLA VAVLGLLAGL YTVAGGLKAV
VYTDAVQAVL LLLGAVLVAV LSFKAVGSWE VVEAQIPVGD LSIIRPADDP VLPWPGLVTG
VFLLGFYFWC TNQFMVQRVL GARDLNHGRW GSLFAGLLKL PVLFIMVLPG IFARILYPPE
QYPMLAANTD LVFPTLLFDL LPAGIRGLVI TALVAAIMSS VDSTLNSAST LVTMDFIRRL
KRRDSHELVG AGRWVTVVFM ALAILWAPQI VRFPNLWTYL QAMLAYLAPP VVACFLVGIF
WKRATRSSAF AGLVVGHLAA AVFLGLNLTD RLIVQTGPLS PAQQALVAAG VPVLHFLYLP
PILLAISVIA MVVTSLLQPP PAPEEVEGLT WSPEFFRQES RELAGLPWYQ NYRIQALGLL
VLIAWILIWF R
|
|---|
| |