Gene Rmar_2102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2102 
Symbol 
ID8568763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2453510 
End bp2455264 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content64% 
IMG OID 
ProductAAA ATPase central domain protein 
Protein accessionYP_003291370 
Protein GI268317651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGC CCAACACCAC ACCCGCCGAC GCCTCGGTCG TTTATCCCGA CTGGGTACGT 
GAACTGGCCC GCCGCTACTT TACGAAAACT GTCAACCAGT TCATCCTCCA CGGCAACGTG
CGGGATCTGG TCCCGCTGGT CGAGGCCGAT CAGGTGCGCT ACGTGCCACT GCGCGACTTT
CTGCGGGACG ATCTGTTTGC GCCGCGCGAT CTGGTGCTCT TCTACGACCG CTCGGCCGGA
TTGCAGTTCG CCCGTCCGGA CATGCGCCAG GATTTCCTCC GGGCGCTGGA AGGCTTCGAC
CACCTGCACG GCACGAACTA CACGCGCCAG ATTCCACGCG ATCCGGTGCG CGTCTTTGCG
TTGCTGGAAC GCTACTTCCG CCTGCGCCTG GCCGAAGGCC GACGCATCGC CTGCGTGATC
GACTACGCCG AGACGATCGT CCCCATGGCC GAAGGCGCCT TCTCCAGCAG CGAAGACCGC
GACGCGCTGG TCTTCTTGCT CAAGTGGTCC CACGATCCGC TGTTTCTGAA AAGCGACTTC
ACGATCTGCC TGATCACGGA GAATCTGACC GATCTGCACC GTCAGCTCGT GCAGAATCCC
TACACGGCGG CCATTCGGAT TCCGCTGCCC GACGAAGCCG AGCGGCGTCG GTTCATCGAA
GCGTATCTGG GCGATCAGAC CGAGACGTTC CGCGCGCGCT CCGAGATGTC GCCGGCCGTG
CTGGCCCATC ATACGGCCGG GCTGAACCTG GTGCAACTGC GGACCATCCT GGCCGACGTG
CTGGAAAACC ACACGCGGCT GACCTTCGAA CGCCTTTCGG CCACCAAAAA GGCCTTTATC
GAAGCCGAGG CCTACGGCCT GCTGGAATTC ATCGAAACCA ATTACAACCT GGACATGGTG
GCGGGGCACC GGCAGGCCAA AGCGCTGCTG CGGGCCGCCG CCGAAGCGCT GCGCCAGGGG
CGCTACGACG TGCTTCCCAT GGGCTATCTG GTGACCGGTC CGGTCGGCAC CGGCAAGACG
TTCCTGATCA CCTGCTTCGC CGGAGAGATC GGCATCCCCA TGGTCCGCTT CAAGAACTTT
CGTTCTCAGT GGCAGGGCGT GACCGAGGGC AACCTGGAAA AAATCCTGAA CCTGCTGGAA
GCCATGACGC CGGTGGCTGT CATGATCGAC GAAGCCGATG CGGCGCTGGG CCATCGGGAA
GCCGAGGGCG ACTCGGGCGT CTCGAAGCGC GTATTTGCCC AGATTGCCTC GTTCATGAGC
AATCCGGCCC ATCGGGGACG CATCCTGTTC TTCCTGCTGA CGGCTCGCCC CGATCTGATG
CCGGTCGACC TGAAACGCCA GGGCCGCGCC GAAGAACATA TCGCCCTGTT CTACCCCGAC
ACCCGGGAAG AGCGCGACGA ACTGCTGCAG GTGATGCTCC GACGTACGGG CATCGAGCTG
TCGCTGGACG AAGTGCCGGA CGTGCTGCGC AACGGCGAGC GGTCGTTCAG CGGTGCCGAG
TTGGAAGCGC TGCTGACACG GGCCAGATTC CGGGCGGCCG CCCGGGGACT GGCACAGGTC
ACGCCGGAAT TGCTCCAGGA GGTGGTGGAC GACTTTCTGC CGCCCACCTA CCCCCTGGAG
ATCGAACTGC AGACGCTGGT TGCCGCACTG GAATGCACCA GCCGCACCCT GCTTCCCGAA
TCCCTGCGCA CTATGGACCG GGAAGCCATG GCCGCACGCG TAGAGACGCT CAAGCAGCTG
CTGCAAATGC GCTGA
 
Protein sequence
MALPNTTPAD ASVVYPDWVR ELARRYFTKT VNQFILHGNV RDLVPLVEAD QVRYVPLRDF 
LRDDLFAPRD LVLFYDRSAG LQFARPDMRQ DFLRALEGFD HLHGTNYTRQ IPRDPVRVFA
LLERYFRLRL AEGRRIACVI DYAETIVPMA EGAFSSSEDR DALVFLLKWS HDPLFLKSDF
TICLITENLT DLHRQLVQNP YTAAIRIPLP DEAERRRFIE AYLGDQTETF RARSEMSPAV
LAHHTAGLNL VQLRTILADV LENHTRLTFE RLSATKKAFI EAEAYGLLEF IETNYNLDMV
AGHRQAKALL RAAAEALRQG RYDVLPMGYL VTGPVGTGKT FLITCFAGEI GIPMVRFKNF
RSQWQGVTEG NLEKILNLLE AMTPVAVMID EADAALGHRE AEGDSGVSKR VFAQIASFMS
NPAHRGRILF FLLTARPDLM PVDLKRQGRA EEHIALFYPD TREERDELLQ VMLRRTGIEL
SLDEVPDVLR NGERSFSGAE LEALLTRARF RAAARGLAQV TPELLQEVVD DFLPPTYPLE
IELQTLVAAL ECTSRTLLPE SLRTMDREAM AARVETLKQL LQMR