Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2102 |
Symbol | |
ID | 8568763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 2453510 |
End bp | 2455264 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | AAA ATPase central domain protein |
Protein accession | YP_003291370 |
Protein GI | 268317651 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCTGC CCAACACCAC ACCCGCCGAC GCCTCGGTCG TTTATCCCGA CTGGGTACGT GAACTGGCCC GCCGCTACTT TACGAAAACT GTCAACCAGT TCATCCTCCA CGGCAACGTG CGGGATCTGG TCCCGCTGGT CGAGGCCGAT CAGGTGCGCT ACGTGCCACT GCGCGACTTT CTGCGGGACG ATCTGTTTGC GCCGCGCGAT CTGGTGCTCT TCTACGACCG CTCGGCCGGA TTGCAGTTCG CCCGTCCGGA CATGCGCCAG GATTTCCTCC GGGCGCTGGA AGGCTTCGAC CACCTGCACG GCACGAACTA CACGCGCCAG ATTCCACGCG ATCCGGTGCG CGTCTTTGCG TTGCTGGAAC GCTACTTCCG CCTGCGCCTG GCCGAAGGCC GACGCATCGC CTGCGTGATC GACTACGCCG AGACGATCGT CCCCATGGCC GAAGGCGCCT TCTCCAGCAG CGAAGACCGC GACGCGCTGG TCTTCTTGCT CAAGTGGTCC CACGATCCGC TGTTTCTGAA AAGCGACTTC ACGATCTGCC TGATCACGGA GAATCTGACC GATCTGCACC GTCAGCTCGT GCAGAATCCC TACACGGCGG CCATTCGGAT TCCGCTGCCC GACGAAGCCG AGCGGCGTCG GTTCATCGAA GCGTATCTGG GCGATCAGAC CGAGACGTTC CGCGCGCGCT CCGAGATGTC GCCGGCCGTG CTGGCCCATC ATACGGCCGG GCTGAACCTG GTGCAACTGC GGACCATCCT GGCCGACGTG CTGGAAAACC ACACGCGGCT GACCTTCGAA CGCCTTTCGG CCACCAAAAA GGCCTTTATC GAAGCCGAGG CCTACGGCCT GCTGGAATTC ATCGAAACCA ATTACAACCT GGACATGGTG GCGGGGCACC GGCAGGCCAA AGCGCTGCTG CGGGCCGCCG CCGAAGCGCT GCGCCAGGGG CGCTACGACG TGCTTCCCAT GGGCTATCTG GTGACCGGTC CGGTCGGCAC CGGCAAGACG TTCCTGATCA CCTGCTTCGC CGGAGAGATC GGCATCCCCA TGGTCCGCTT CAAGAACTTT CGTTCTCAGT GGCAGGGCGT GACCGAGGGC AACCTGGAAA AAATCCTGAA CCTGCTGGAA GCCATGACGC CGGTGGCTGT CATGATCGAC GAAGCCGATG CGGCGCTGGG CCATCGGGAA GCCGAGGGCG ACTCGGGCGT CTCGAAGCGC GTATTTGCCC AGATTGCCTC GTTCATGAGC AATCCGGCCC ATCGGGGACG CATCCTGTTC TTCCTGCTGA CGGCTCGCCC CGATCTGATG CCGGTCGACC TGAAACGCCA GGGCCGCGCC GAAGAACATA TCGCCCTGTT CTACCCCGAC ACCCGGGAAG AGCGCGACGA ACTGCTGCAG GTGATGCTCC GACGTACGGG CATCGAGCTG TCGCTGGACG AAGTGCCGGA CGTGCTGCGC AACGGCGAGC GGTCGTTCAG CGGTGCCGAG TTGGAAGCGC TGCTGACACG GGCCAGATTC CGGGCGGCCG CCCGGGGACT GGCACAGGTC ACGCCGGAAT TGCTCCAGGA GGTGGTGGAC GACTTTCTGC CGCCCACCTA CCCCCTGGAG ATCGAACTGC AGACGCTGGT TGCCGCACTG GAATGCACCA GCCGCACCCT GCTTCCCGAA TCCCTGCGCA CTATGGACCG GGAAGCCATG GCCGCACGCG TAGAGACGCT CAAGCAGCTG CTGCAAATGC GCTGA
|
Protein sequence | MALPNTTPAD ASVVYPDWVR ELARRYFTKT VNQFILHGNV RDLVPLVEAD QVRYVPLRDF LRDDLFAPRD LVLFYDRSAG LQFARPDMRQ DFLRALEGFD HLHGTNYTRQ IPRDPVRVFA LLERYFRLRL AEGRRIACVI DYAETIVPMA EGAFSSSEDR DALVFLLKWS HDPLFLKSDF TICLITENLT DLHRQLVQNP YTAAIRIPLP DEAERRRFIE AYLGDQTETF RARSEMSPAV LAHHTAGLNL VQLRTILADV LENHTRLTFE RLSATKKAFI EAEAYGLLEF IETNYNLDMV AGHRQAKALL RAAAEALRQG RYDVLPMGYL VTGPVGTGKT FLITCFAGEI GIPMVRFKNF RSQWQGVTEG NLEKILNLLE AMTPVAVMID EADAALGHRE AEGDSGVSKR VFAQIASFMS NPAHRGRILF FLLTARPDLM PVDLKRQGRA EEHIALFYPD TREERDELLQ VMLRRTGIEL SLDEVPDVLR NGERSFSGAE LEALLTRARF RAAARGLAQV TPELLQEVVD DFLPPTYPLE IELQTLVAAL ECTSRTLLPE SLRTMDREAM AARVETLKQL LQMR
|
| |