Gene Rmar_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2016 
Symbol 
ID8568673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2347284 
End bp2348126 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID 
Productcopper ABC transporter, permease protein 
Protein accessionYP_003291285 
Protein GI268317566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCA CCACCGCCCG CGCGACCATC GGCCTGCTGG CCCGCAAAGA ACTGCACGAC 
GCGCTGCGCA ATCGCTGGTT CGTGCTCTAC ACGGTGATTT TTGCCGTACT GTCGCTGGCG
CTGTCGTGGA TCGGTCTGGC GGGGGGCCAG CTCTACGGAC TGGCCGGTTT CGGCCGCACC
ACGGCCAGCC TGATCAACCT GATCATGCTG ATCGTCCCCC TGATGGGCCT CACGCTCGGC
GCGCTCAGCC TGGCTCTGGA GCGCGAGCAG GGTACGCTCC TCTACGTGCT GGCGCAGCCG
GTCGTGCCGG CCGAAGTGCT GCTGGGCAAA CTGCTCGGAT TGGCCACGGC GCTGACGGCC
GCTCTGAGCA TCGGCTTCGG CCTGAGCGGC CTGCTCCTGG CCTGGCGGGG AAGCACCATG
GGGCTGGGCG CCTACCTGGG ACTCTTCGGC CTGACCATCC TACTGGCCCT GCTGAGTCTG
AGTCTGGGCT TGCTCTTTTC AAGTGCACTG CCCCGGACGG CCACTGCGCT GGGAAGCGCC
CTGTTCGCCT GGCTGCTGCT GGTCTTTCTG GGCGACCTGG GGCTGCTGGG CTCGGCGCTC
GTGCTGCGCA TCCCGGTCGA GCAGCTCTTC ACGCTCTCGC TGCTCAACCC GCTGCAGGTA
TTCAAGATCG CCGCCATCCT GCTGCTGCGC AGCGACCTGC AGGTGCTGGG ACCGGCCGGC
CAGTATGCCA TGCACACCTA CGGCATGCGC CTGCTGCCGC TCTCGGTGGG CGTGCTTCTG
CTCTGGTCCC TGCTTCCCCT GCTTCCCGCC TACCTGTTTT TCCGCCGCCG CGGTGCGCTA
TGA
 
Protein sequence
MTTTTARATI GLLARKELHD ALRNRWFVLY TVIFAVLSLA LSWIGLAGGQ LYGLAGFGRT 
TASLINLIML IVPLMGLTLG ALSLALEREQ GTLLYVLAQP VVPAEVLLGK LLGLATALTA
ALSIGFGLSG LLLAWRGSTM GLGAYLGLFG LTILLALLSL SLGLLFSSAL PRTATALGSA
LFAWLLLVFL GDLGLLGSAL VLRIPVEQLF TLSLLNPLQV FKIAAILLLR SDLQVLGPAG
QYAMHTYGMR LLPLSVGVLL LWSLLPLLPA YLFFRRRGAL