Gene Rmar_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2015 
Symbol 
ID8568672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2346411 
End bp2347280 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content69% 
IMG OID 
Productheme exporter protein CcmA 
Protein accessionYP_003291284 
Protein GI268317565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGC TGACGATCGA ACACCTGACG AAACGCTTCG GCACGGTCAC CGTGCTACAG 
GATATTTCCT GCACGGTGGC CCCGGGCGAA AGCGTGGCCC TGTGGGGGCC GAACGGGGCC
GGCAAGACCA CGCTGCTCCG CTGCGTGCTG GGCGTGCTGC CGTTCGAGGG CACGATCCGG
ATCGACGGCC TTGACGTGCG GCGTCAGGGC AAGCAGGCCC GACGGCTGGT GGGCTTCGTG
CCGCAGGAGG TAACCTTCTA TCCCACGCTG ACCGTGGGTG AGACGGCCGC CTTCTTTGCG
CGGCTGCGCG GCCTCGAGCC GGATGAAGCG CGGCGGCGAC TGGCACAGGT GGCCCTCGAA
GATCGTCTGG ATCAACCTGT GCGCACGCTC TCGGGCGGTC AGCGTCAGCG GCTGGCCCTG
GCCCTGGCGC TGCTGGGCGA TCCGCCGTTG CTGCTGCTGG ACGAGCCGAC GGCCAGTCTG
GATGTCCGCA GCCGCGCCGA GTTCATGACC CACCTGCAGA CGCTGCTGGA GCAAGGCAAG
ACGCTGCTGT TCTCGACGCA CCGCTTCGAG GAGGTGGAAC ATCTGGCCCG CCGCGTGCTC
CTGCTCGAAA ACGGCCGCCT GGAGGCCGAC ACCACACCGG GCGAACTGGC CCGCCGGCTG
TTTCCCGAAA CCACCCACTA CCGCCTGCGC CTGCACCTGC CCGAGCCCCA ACGCCCCGGG
GCGCTACAGG AACTGCGGGC GCACGGCTTC GAGGTGTGGA TGAACGGCCA CGGCCTGGAA
GTGCGCGTGC CCGCCGACGA AAAAGCCGCG CCGCTGCTGC TGCTGAGCCG CGCCGGCTTC
GAGGTGACCG ACTTTGAACT GCATGCCTGA
 
Protein sequence
MALLTIEHLT KRFGTVTVLQ DISCTVAPGE SVALWGPNGA GKTTLLRCVL GVLPFEGTIR 
IDGLDVRRQG KQARRLVGFV PQEVTFYPTL TVGETAAFFA RLRGLEPDEA RRRLAQVALE
DRLDQPVRTL SGGQRQRLAL ALALLGDPPL LLLDEPTASL DVRSRAEFMT HLQTLLEQGK
TLLFSTHRFE EVEHLARRVL LLENGRLEAD TTPGELARRL FPETTHYRLR LHLPEPQRPG
ALQELRAHGF EVWMNGHGLE VRVPADEKAA PLLLLSRAGF EVTDFELHA