Gene Rmar_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1798 
Symbol 
ID8568450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp2106500 
End bp2107207 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID 
ProductTetratricopeptide domain protein 
Protein accessionYP_003291070 
Protein GI268317351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTCG CTTCACGTAC GGCTACTTCG AAGCGCAAGG CGTTGCGCGA GGACACGGTT 
GTCACGCTCT ATGCTCGCTG GCTGGACTTC TACCACCGCT ATCGCAAACA GCTCTATGCG 
GGGCTGGCGG CCATTGCGGT AGCCATTTTC GGCATCATCG GTTATTCCTA CTACCAGCGG 
CAGCAGGAGC AGCGGGCGCA GCAACTGCTG GGCGAGGTGC TTCCGCTCTA TGAGCAGGGG 
AAGTACCGGG AAGCGCTGGA CGGTGCCGAC GGCCAATCCG GCCTGCTGGC GCTGGCGCGC 
GACTACGGGA GCACGGACGC GGGCAACCTG GCCCGCTTCT ATGCGGCCGA CGCGCTCTAC 
CGGCTGGGGG AGTACGACCG GGCCCTCGAG CTGTGGCAGG CGTTCGACAG CGACGATCCG 
ATGCTGGCGG CGGCTGCACT GGCCGGACAG GCCGCCGTCT ATGAAAACAA AGGCGAGCAC 
GAGCGGGCCG CCGAGCTGTA CCGCCGGGCG GCCGACCGCT ACGACAATCC GGTCGTGACG 
CCGCAGTACC TGCTCCGGGC CGGACGCAAC TACGAGGCCG CTGGCAACCT GGAAGCAGCC 
CGGCGCATGT ACGAGGCCAT CCGCGAACGT TATCCGGAAT CCGCACAGGC CACCGAGGCC 
GAGATCGCGC TGGCGCGTAT CGCAGCGCGC GCTTCGCAAC CGTCCTGA
 
Protein sequence
MAVASRTATS KRKALREDTV VTLYARWLDF YHRYRKQLYA GLAAIAVAIF GIIGYSYYQR 
QQEQRAQQLL GEVLPLYEQG KYREALDGAD GQSGLLALAR DYGSTDAGNL ARFYAADALY 
RLGEYDRALE LWQAFDSDDP MLAAAALAGQ AAVYENKGEH ERAAELYRRA ADRYDNPVVT 
PQYLLRAGRN YEAAGNLEAA RRMYEAIRER YPESAQATEA EIALARIAAR ASQPS