| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1771 |
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| Symbol | |
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| ID | 8568423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 2073999 |
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| End bp | 2075186 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_003291043 |
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| Protein GI | 268317324 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.799068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTGC TGGCGCTGTG GCTGGGCGGC TGGCTCCTGG CGGCCGATAC CAGCCGGTTC
ACCTCCGAGC TGGCCGTCGC CTACACAGCC GACGTCATGA GCCCGCTGGC CGGCGCGTCG
GTGCGGCCGG TGTGGATGGA CAACGTGGAC GTCACGCTGA CGCTGCACCT GACGCCGCGC
ACCACGCTGT TCCTTTACGG ACTGGGCAAC CAGGGCGGCT CGATCAGCGC GCGGGTCGGC
GATGCACAGG GCGTCAGCAA CATCGAGGCG CCCACCTCCT GGCGACTCTA CGAAGCGTTT
GTCGAGCACG TGACGGCCAC CGGCCGCCTT TCCGTGCTGG CGGGGCTGTA CGACCTGAAC
AGCGAGTTCG ACGTGCTCCC GGCCGCCGGG CTTTTCATCA ACAGCTCGTT CGGCATCGGC
GCCGAACTGG CCGCCAGTCG CCCGCAGGGA CCGTCAATTT TCCCCGTGAC GTCGCCCGGA
CTCCGGCTTC GCCTGGGTTT TCAGCGAAGC GCCCGGTATG CCGGTTACCT GCAGGCCGTG
GCGCTCGACG GGGTGCCGGG GCACCCGGAC CGCCCCGCCG GCACGCACAT CGTCTTCGGG
CGTAACGACG GCCTGCTGCT GGTGGCCGAA GCCGGTGCGC TGGTGCATCC GGAAGCACCG
CTGCCCGACG GCTCGCCGAT CCGGCTCGTC AGCCGCCTGC ACGAACATCC CCACCATCAC
AAACTGGCAC TGGGCGTCTG GTACTACACC GCCCGCTTCC GGTGGCTCGA CGCAGACCGC
ACGCAACGGG GCAATGCCGG CGTCTATCTA CTGGGTGAAT CGCGGCTCTA CCGGGAAGAC
CCCCGCACGC TCTGGGCCTT TCTGCGGGTG GGCGTGGCGC ATCCGCGCGT GAACCGCTTC
GGCGCCTACA CGGGCGGGGG CTTCAGCGGA AGGGGCTGGG TGCCGGGACG CCCGGCCGAT
CGCATGGGAC TGGCCGTCGC CGCCGCCCAC AACAGCAGCG CCTACCGCCG CCTGCAGCGA
CGGCAGGGCA CGCCCGTGCA CCGTACCGAA TGGGTCTTCG AAGGCACCTA TCTGCTTGCC
CTCGGCGCAG CGCTCCACCT GCAGTTCGAT CTGCAATGGG TGCTCCACCC CGACACCCGC
GCCGGCAGCG TGCTGGTCGG CGGCCTTCGC CTGCTGTGGA GTCCTTAA
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| Protein sequence | MLLLALWLGG WLLAADTSRF TSELAVAYTA DVMSPLAGAS VRPVWMDNVD VTLTLHLTPR
TTLFLYGLGN QGGSISARVG DAQGVSNIEA PTSWRLYEAF VEHVTATGRL SVLAGLYDLN
SEFDVLPAAG LFINSSFGIG AELAASRPQG PSIFPVTSPG LRLRLGFQRS ARYAGYLQAV
ALDGVPGHPD RPAGTHIVFG RNDGLLLVAE AGALVHPEAP LPDGSPIRLV SRLHEHPHHH
KLALGVWYYT ARFRWLDADR TQRGNAGVYL LGESRLYRED PRTLWAFLRV GVAHPRVNRF
GAYTGGGFSG RGWVPGRPAD RMGLAVAAAH NSSAYRRLQR RQGTPVHRTE WVFEGTYLLA
LGAALHLQFD LQWVLHPDTR AGSVLVGGLR LLWSP
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