Gene Rmar_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1749 
Symbol 
ID8568401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2031194 
End bp2033464 
Gene Length2271 bp 
Protein Length756 aa 
Translation table11 
GC content62% 
IMG OID 
ProductFibronectin type III domain protein 
Protein accessionYP_003291021 
Protein GI268317302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTGG TTCGTCGGTT AACGGTACAG ACGACCGGTC TGGTCCTGGC GCTGCTGCTG 
GGCGCCGGGC TGGCCCGCGA CGGCCGAGCG CAGTGGAACA TGCGCTGGCT GTCGGTAGGC
GACTTCCAGC ACCGCTATGT GGGCGGGGGT GCCCAGCCCG AAACCTATGA CGAGGTGATG
TTCCAGTGGC CGGGCATCCG CCCGCAGGTG TCCTACATGC ACGGCCAGGC GCTGTGGATC
AGCGTCAAGA ACTTCACCAG CGAAGAAGGG ACCCATTTTC CGGTGCGGGT TTCGCACATT
GGTCCCCGTA CCGAGGGCAT TGGTGAGTTC TTTGAACGCA ACATAAGTCT GATCGGACGT
TTCGAGGCTC CGCTGGTGCT GGTGGACGGA CTCGAATCAT TCCGCCGCCC GGCGCCGCTG
GACGAGGTGG ATCCTGAGCT GAAGGCCGAC CGCATGGTCT ATAACGAGGT GAACACGTCG
GTCGGCATTA CAATGATCCA GAAAGCCTAT CAGCTCAGCA ATGAGTTCCA TGACGACTAT
CACATCGTGG AGTACTCTTT TATCAACACC GGTAACGTAG ATGGCGACGA CGAGATCGAG
TTGCCAGACC AGTCGCTGGA AGACGTGTAC ATCACGATCA TTCGTCGTCC GAAGATCAAC
GCGCCGGCAG GCTCCTGGGG CGGTAGTGCC AATGCCACAG CCTGGGGCGG CTACGTGATG
ACGGACGCCG TCGGCGACGG CTACCAGGAC TACGGTCTGG ATGAAACCTG GCGGGGCCAT
TTCTCCTGGC TGGGCTACAT CCCCGAACAG ACGCGCTTCA ACACGATCGG CAACCCCATG
TGGGAAAACA CGGTCGGCTG GTGGTACACG CTTGATGTGG ATACCGTAGG CCGACTGGGC
GGTGCGGCGA TGGTGGGCAC CTTTGTGCTC CATGCCGACG GCCAGCCGCA CGACCCCGGT
ACCGTGCTTC CGGATGATCC GACCCAGCCC CGGGTGATGA CCTACCTCGA CTCGGACGAT
GGCGACCTGA CCGGAAGCAA CAACCACAAC AACGTCCAGG CCATGCAGCT GGAGCGGCAG
TGGATCGAGC AGGGCGCACC GGTGCGGCAG TACAGCACCA CGGGCTGCAC CTGGACGGGC
CTCCGCACCA TTCCCTCGCA GGCCTTCTGC GCCTGGCCAC CGCCGGATCC CAATGTGCAG
GTCGACTTCG TCAAGCACTT TGCCGCACAG AAGAGCGATC CGCGTATTGG CTATAACAGC
TGGAGCTATG CCTACAGCTT CGGCCCCTTT GATATGGCGC CCGGCCAGGA AGTGCGGGTG
GTGCTGGTCG AGGGGGTCGC CGGTCTGAGC GATGAACTCA GCCTGGAACT GGGTAAGTGG
TACAAACGGC AGGTGCTGGC CAACGGCGTC GATGCAGCCG ATCAGGCCAT CTTCTGGTGG
AATCCCGAAA CGAATCAGCG CTGCAACGAA GGCGAGGAAG GCTGCATCGG CATGACCAAG
AACGAATGGG TCATGACCGC CCGCGACTCG CTCTTCCAGA TGATAGAACG GGCCCGGGCC
GTCTACGCCA ACGGTTTCAA TGTCATCCGG CCGCCCATGC CGCCACGTCG CTTCGAGGTA
ACCTCCGGAG TTGATAAGAT CACAATTGAA TGGGAACCCT ATCCCGGCGA GGAGCCGCCG
GGCGGCTGGG AGCTCTACCG GGCGCAGAAC CGCTATGACG GGATTCCTGC TCCGGATTCG
ACGACGGCTT ACAAGCTGAT CGCCAAACTC CCGCCCAACG CGACCCGCTA TGAAGATACC
GACGTGTCGC GTGGCGTAGC CTACTACTAC TACCTCCAGG CCGTCGGCGA GCCCACGCCG
ATCGACCCGC TGGCGATCAA CGGTACGCCC GATGGGCGAC CGCTGCGCAG CAGTCGGTAC
TATGCCCAGA CCTACGACCC GGCCATCCTC AAGCGGCCGC CGGGTGAGAC CATCTTCAAA
GCCCGGGTCG TCCCGAATCC CTACATCATC GCGGCCGACC AGAACCTGCG CTGGCCGGAC
CAGCAGGATA AGCTGGGCTT CCTGGACATC CCCGGTCAGT GCACGATTGA GATCTACACG
GAACTGGGCG AACTGGTGAA ACGAATCGAG CACACCGACG GCAGCGGTGA CGAATACTGG
GACCTGACCA CGGACGCCCG GCAGGTGGTC TCCAGCGGTA TTTACATCGC CGTGATCAAA
GACCACACGA CCGGACAGCA GTTGATCCGC AAGTTCGTCG TCATTCGATG A
 
Protein sequence
MKVVRRLTVQ TTGLVLALLL GAGLARDGRA QWNMRWLSVG DFQHRYVGGG AQPETYDEVM 
FQWPGIRPQV SYMHGQALWI SVKNFTSEEG THFPVRVSHI GPRTEGIGEF FERNISLIGR
FEAPLVLVDG LESFRRPAPL DEVDPELKAD RMVYNEVNTS VGITMIQKAY QLSNEFHDDY
HIVEYSFINT GNVDGDDEIE LPDQSLEDVY ITIIRRPKIN APAGSWGGSA NATAWGGYVM
TDAVGDGYQD YGLDETWRGH FSWLGYIPEQ TRFNTIGNPM WENTVGWWYT LDVDTVGRLG
GAAMVGTFVL HADGQPHDPG TVLPDDPTQP RVMTYLDSDD GDLTGSNNHN NVQAMQLERQ
WIEQGAPVRQ YSTTGCTWTG LRTIPSQAFC AWPPPDPNVQ VDFVKHFAAQ KSDPRIGYNS
WSYAYSFGPF DMAPGQEVRV VLVEGVAGLS DELSLELGKW YKRQVLANGV DAADQAIFWW
NPETNQRCNE GEEGCIGMTK NEWVMTARDS LFQMIERARA VYANGFNVIR PPMPPRRFEV
TSGVDKITIE WEPYPGEEPP GGWELYRAQN RYDGIPAPDS TTAYKLIAKL PPNATRYEDT
DVSRGVAYYY YLQAVGEPTP IDPLAINGTP DGRPLRSSRY YAQTYDPAIL KRPPGETIFK
ARVVPNPYII AADQNLRWPD QQDKLGFLDI PGQCTIEIYT ELGELVKRIE HTDGSGDEYW
DLTTDARQVV SSGIYIAVIK DHTTGQQLIR KFVVIR