| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1718 |
|---|
| Symbol | |
|---|
| ID | 8568370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 1994310 |
|---|
| End bp | 1994768 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | Biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_003290991 |
|---|
| Protein GI | 268317272 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000108477 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCGC AGCACTTTAA AAAGAAGGCG GAAACCAAGC AGGCGATCCC CACCGCCTCG
CTCCCGGACA TCATTTTCAT GCTGCTGATC TTCTTCATGG TCAGCACGGT GCTGCGGGAG
ACGACTATCC AGGTGCGGAC GCTCCTGCCA CGGGCCGAGG CGCTGACCAA GATCGACCAG
AAGCGCCTGC TTTCCTACAT TTATATCGGT CCGCACAAAA AACCCGATGG ACGGTTAGGT
GAAACGCGGG TCCAGATCGA TGACGCGTTG ATCGACGATC TCACGTTGAT CCGCACGATC
ATGTACAACA AGCTGCTGGA GCAGCCCAAG CTGATCGTGT CGCTGCGTAT CGATCAGGAC
GCCAGGATGA AGCTGGTCTA CGACGTGCAG CAGGAACTTC GGGAGGCCGG AACGCTTCGC
ATCAACTACT CGGCGCGGCC TGAGGCGCCT GCGTCGTAG
|
|---|
| Protein sequence | MASQHFKKKA ETKQAIPTAS LPDIIFMLLI FFMVSTVLRE TTIQVRTLLP RAEALTKIDQ
KRLLSYIYIG PHKKPDGRLG ETRVQIDDAL IDDLTLIRTI MYNKLLEQPK LIVSLRIDQD
ARMKLVYDVQ QELREAGTLR INYSARPEAP AS
|
|---|
| |