Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1637 |
Symbol | |
ID | 8568289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 1897037 |
End bp | 1899439 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | CRISPR-associated protein, Csm1 family |
Protein accession | YP_003290911 |
Protein GI | 268317192 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.02785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTACT CTGAAAGAGA AGCGCTGTAC CTGGGCGCGC TTTTGCATGA CATCGGTAAG TTCCGACAGC GCGCTCTTGA TGAGCACCTG AAGCATCCGT TGCTTTCAGC TCAGGTGATC GATGCGTTAT TTGAAGATGA ACGCATTAAA ACAATTGCAG CTTTTCATCA TCTCGAAGAT TTGCGAAGGA GCAATCTGAA AGGATCGTTA CGCAGACTGG CCGAGATTGT CTGCGAGGCG GATTCTCTGG CCAGTGGCGA GCGACGGCGT GACACAGAAA CATTACAGCG GCCACTGCAG AGTATTTTTT CAGCAGTCCG ATTGGGTGAG ACGCAAGGCA ATCCGCCGGA GGTCTGGCAG CCGATCGGCC GATTGAACGA TGAATATTAT CCATTTCCTG AACAGAACCT TCCTGAGCCA GCGCAACTGC AGGAACGATA TCTGCAGCAC TGGCAGGCGT TTCTGCAGGA ACTCGCGCAA TTTGGTGCGG CGATACACCC GGACACCTTA CTGGCGCTGC TTAAAAAGTA TCTCTGGTGC GTTCCGTCCG CTTCCTATCG AAATGTTCCG GATATTTCTC TATATGAACA CAGTCGTCTG ACGGCTGCTC TGGCTGTCTG CCTGTACGAC TTTCTACAAG AACGACCAGA CAGCTCCGCG CAATCAGATG TTTTTGATAG GAATGAAAAT CGGTTTCGGT TAGTCTGTGG CGATATTACA GGAATTCAGC GATACATTTA TAACATTGCA CACAAAGGAG CTCTTCGAGC GCTTAAGGGA CGTTCATTTT ACCTGCAGCT TCTGTTACAG GTAGCAGCGC GTGAACTGTT GCGCCGTCTG GATTTGCCGC TGGCCTGCCT GCTGTATGCC AGTGGTGGGA AGTTCTACGT GCTGGCGCCC AATACCAGCA GGTTTTCTGA AGTACTACGT CGCTTTGAAC AGGAGGCCCA GGAATGGTTG CTGGAACGCT ACGACGGAGC AATCGGGCTC GTTATAGCCC ATGTCGAGCT GTGTGGTCAG GATTTTGTTG GAGAGCAGCA TCCACATCCC ATCACTCGAA AGTGGGCTGA AGTTACTGAA AAAATCGAGC AGAAGAAACG CCAGCCTTTT AGTGCCCGGA TTACGCAGGA AGATTTCTGG GATCCCTGGG GCCCCGGTGG GTCCATTGTT ACATGCTATG CTACCGGACG CTACCTGTGC CGGACCGGGG AAGAGGCAGA AAAGCTACAA GCTGAAGTAA TCTTTCCCTA CCAGGAAGAA AACGAAGCAA CACCCCGGTA TATCAGTCAG GAACAGCATG AGGCCCGAGA ACTGGGACGA GCGTTACGAA GTGCTCGAGC CATCGAGTTG TTGAGCCCCG ATGCTCCCGG TGATGGCAAT GCGTTGTTCA ATGGCTGGCG TTTTCGGATT TATGAAGGGC CGCCTGAAGT TGGGAATGTT CAGGGCGAGT TAATCTGGCT CAATACAGAC GAAGTGCGGC CCGGAGCGCT GCATCAGAGC TGGATGTTTT ACGGGGGAAA CTGGGCGTTC GAAGGTGACT TCGACCAGGC GGCCGAGCGC GCCCAGGGGA GCAGGTTGCT GGGGGCGTTG CGGATGGATG TCGATAATCT GGGACAGATT TTCCGAGATG GACTGGGAGC GCATGCGACG TTTTCCCGAG TAGTGCAGCT TTCCACAATG CTTGACTTTT TCTTTGCCGG GTATCTGAAT AGACTCAGAA GGCTACGATG GAGTGTGTGT GAGGGGGTAC AGCAAAATCA GGGAGATCAA TTAAAGGATA TGATACAGAT TGTTTATGCG GGTGGAGATG ATCTTTTTAT CGTGGGGGTC TGGAATGTGC TTCCTGATGT GGCACAATGG ATTCGACGCG AGTTTGATCG ATTTACAGGA GGTAATCCAT ATATGACACT TTCTGGAGGC ATTGCCCTCT TTCCTCCTAA ATTGCCACTG TACCATGCAG CGCAGGAAGC GGGACGGGCT GAAGAGAAGG CCAAAGATTT TCGTCGCCAT GTGCGCCGGA ATGGTGTAGA GGTGGCTACA GTTTCAAAAA ATGCGCTGTC TTTTCTGGAA ACACCAATCA GCTGGAACGA TCTGGAGGTG CTGCACCAGT GGATGGTGCG ACTCTACCAG GCTATTCAGG AAGATCGCGT CAGTCGTGGT ATCTTAGGCC GGTTATACGG GATCTATGCA GAGTATCAGC AGCATCAGAA TATCTGGGGC CGATGGCGGT GGCGCGCCTG CTATAGCCTG GCGCGGTATG CGAATCAGCA CAAAGCGTTC GCCGACGATC TGCTACAACT GGCAGCCGAG CTCTTCTGCA GTACCTCGAC GGAAAGCGAC TTTGTTGCGC TTATACATAT ACCTGCCCGC TGGACCGAAA TGCTAACCCG TAAGGAGGAG TAG
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Protein sequence | MPYSEREALY LGALLHDIGK FRQRALDEHL KHPLLSAQVI DALFEDERIK TIAAFHHLED LRRSNLKGSL RRLAEIVCEA DSLASGERRR DTETLQRPLQ SIFSAVRLGE TQGNPPEVWQ PIGRLNDEYY PFPEQNLPEP AQLQERYLQH WQAFLQELAQ FGAAIHPDTL LALLKKYLWC VPSASYRNVP DISLYEHSRL TAALAVCLYD FLQERPDSSA QSDVFDRNEN RFRLVCGDIT GIQRYIYNIA HKGALRALKG RSFYLQLLLQ VAARELLRRL DLPLACLLYA SGGKFYVLAP NTSRFSEVLR RFEQEAQEWL LERYDGAIGL VIAHVELCGQ DFVGEQHPHP ITRKWAEVTE KIEQKKRQPF SARITQEDFW DPWGPGGSIV TCYATGRYLC RTGEEAEKLQ AEVIFPYQEE NEATPRYISQ EQHEARELGR ALRSARAIEL LSPDAPGDGN ALFNGWRFRI YEGPPEVGNV QGELIWLNTD EVRPGALHQS WMFYGGNWAF EGDFDQAAER AQGSRLLGAL RMDVDNLGQI FRDGLGAHAT FSRVVQLSTM LDFFFAGYLN RLRRLRWSVC EGVQQNQGDQ LKDMIQIVYA GGDDLFIVGV WNVLPDVAQW IRREFDRFTG GNPYMTLSGG IALFPPKLPL YHAAQEAGRA EEKAKDFRRH VRRNGVEVAT VSKNALSFLE TPISWNDLEV LHQWMVRLYQ AIQEDRVSRG ILGRLYGIYA EYQQHQNIWG RWRWRACYSL ARYANQHKAF ADDLLQLAAE LFCSTSTESD FVALIHIPAR WTEMLTRKEE
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