| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1559 |
|---|
| Symbol | |
|---|
| ID | 8568211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 1817242 |
|---|
| End bp | 1818678 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003290834 |
|---|
| Protein GI | 268317115 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.462896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCC CCGTGCCCTT CGACCCCGCT CCAACGCTCG GCTACCTGCC CTGCTGTGTG
GAAGGGCCGG CGGACTGGCT ACCGAAGGCG GCCTATGCGC TCCGGATGCT GCTGCTGCCG
CTGGGCTGGG CACCGCGCTG GGTCGATCGC CCCTCGCTGA GGGCGCTGGG CACGGGCATC
TACTACGGGC CGGTTGCTAC GGGCTGGCCA GACGGGGTGC TGGCGCTTCC GCTTCACGAA
ACGACCCCGG CCTATTTTGC TGCCGGCGTG CCCTATGCGG CCGCGCGCGT CCGCTGGCGG
TGGAACGGCA CGGAGCGCTG GCCGACGCTG TTCGGACACC CGGACGGCTC GGCCGACGAC
CCGGTCGCCT CCGTCTTTTT CTGGCTGGCA GGCTGGCAGG AGCACACGAA CCGGAGGCGC
GACGAGCACG GCCGCGTGCG CTTTGCCGAT TCGCTGCAGG CAAGGCTGGG CATCGCCACG
CGACCGCCTG TCGAGGTCAC CCGCGCGGCA CTGGCCCGGA TGCTGATGCA ACGCGGGGTG
CCGGTGCGGC CGCGTCGCTG GCACGGACGG CCCTGGGCGC TCTGCCCGAC GATCGACATC
GATTATCTCC GGAAATGGCG GCCGGGCATT CTCTACCGGG AGTTTTTTCT GTACCCGGTG
CGCAACCTTT CGCGCCAATC GCCGGGCGCC CGCCTGAAGC GGCTGCTTGG AGTGACCGGC
GAAATGCTCG GGCGCGCAGA TCCGTTTCGC ACCGCTTTCC GGCGAATTCT TGCGCAGCTC
CGCGCGCTCG GGACGGGCAC TTTTTTCTTT AAAGCCGGGG CCACGAGCGC TCATGACGTG
GGCTATCCGC TGGGGCGAAC GGCCCGCCGA TGGCTGGGGG CGCTCCGGGA GGCCGGCATG
GAGGTCGGTC TGCATCCGAG CTACCACGCC GCCCTGCATC TCGGACACCT GAGGCGCGAG
CGCGATCGCC TGGCGGCCCT GCTGGACCGT CCGCCGCTGT TGGTGCGCAC GCACTACCTC
CGCTGGGTCG AGCCGACGAC GCCCCGGATC CTGGCCGCGG CCGGTTTCCA GATCGACAGC
ACGCTGGGCT GGCCCGATCA CGAAGGATTC CGGCGGGGCA CCTGCCTGCC GTTTCAGCTC
TTCGACGTAG CGGCCAATGC GCCGCTGCCG CTCTGGGAAA TGCCGCTGGC CGTCATGGAG
TCGGTGCTGT TCGTGCGGCG CGAGCTGGGA CCGGACGAAG CGCTCCGGGC AACCGAGGCG
CTGCTCGAGG CCTGCCGACG CTATGGGGGC GTGTGCGTGG CGCTCTGGCA CAACACGCTC
TGGGACGAGC GCGACTTTCC CGGCTGGGGC GTCCACTTTG AGCGGACGCT GCAGCAGGCC
GACGCAATGG GGGCTTTCAT CGCCGATCTA CAATCGGCGA TCAGAAGCTG GTGTTAG
|
|---|
| Protein sequence | MAGPVPFDPA PTLGYLPCCV EGPADWLPKA AYALRMLLLP LGWAPRWVDR PSLRALGTGI
YYGPVATGWP DGVLALPLHE TTPAYFAAGV PYAAARVRWR WNGTERWPTL FGHPDGSADD
PVASVFFWLA GWQEHTNRRR DEHGRVRFAD SLQARLGIAT RPPVEVTRAA LARMLMQRGV
PVRPRRWHGR PWALCPTIDI DYLRKWRPGI LYREFFLYPV RNLSRQSPGA RLKRLLGVTG
EMLGRADPFR TAFRRILAQL RALGTGTFFF KAGATSAHDV GYPLGRTARR WLGALREAGM
EVGLHPSYHA ALHLGHLRRE RDRLAALLDR PPLLVRTHYL RWVEPTTPRI LAAAGFQIDS
TLGWPDHEGF RRGTCLPFQL FDVAANAPLP LWEMPLAVME SVLFVRRELG PDEALRATEA
LLEACRRYGG VCVALWHNTL WDERDFPGWG VHFERTLQQA DAMGAFIADL QSAIRSWC
|
|---|
| |