| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1482 |
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| Symbol | |
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| ID | 8568133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | - |
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| Start bp | 1730331 |
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| End bp | 1733486 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003290757 |
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| Protein GI | 268317038 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0024542 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCGTC AACGATTGAT GGAACGTGTC CGGCAAGCGG CCGTCGTTGC CCGGCCGGGC
ACGATTGTGC TGGTTTTGCT GGGACTGCTC TGGCTGGGAA ATGTCGGGGA TGTCTATGCC
CAGGTGGTCG TGTCCGGCCA GGTAACCTCG GCCGAAGACG GCCAGCCGTT GCCCGGTGTC
AACATCGTGG TGAAAGGCAC AGCCATTGGC ACGGCTACCG ATCTGGACGG GCGCTATTCG
TTGGCGGTGC CTTCGCCCAA CGACACGCTG GTCTTCTCGT TTGTGGGCTT TGAGACCGTC
AGCGTTCCGG TAGCCGGACG CTCGGTGATC GACGTGCAAC TGCAACCGGC CGTGATCACC
GGCGAAGAGG TGGTGGTGAT CGGCTACGGA ACGGTGCGGC AGCGGGAGGT CTCCGGAGCC
GTCACCACGG TCAGCGCAGA GGAACTGAAT CCGCTGGCCA CGCTCTCGGT CAACCAGATG
GTGCAGGGGA GGGTACCGGG ATTGAGCATG CAGGTGCGTA CCACGCAGCC CGGCGGCGGC
GTCTCGGTCA ACGTGCGCGG CGCCATCTCG CCACGTGGCA ACAACACGCC GCTCTACGTG
ATCGACGGTG TGCCCATCAC CGAGTACCGC CAGTCGGATC CGGGGCTTTA TGACCGGGAC
CTCGGGTTCT ACGGGGGCGT GGATCGCGAT CCGCTGGCAT TTCTGAATCC TGCCGACATC
GAATCGATTA CCGTGCTGAA GGACGCCGCG GCGGCAGCTA TCTACGGTTC GGCGGCCGCC
AACGGCGTGG TGCTGATCAC GACGAAATCC GGGCGGGCCG GCGCCGTGCG TGTCGACTAT
CGCGGCAGCT ACTCGGCGCA GCTCATGCAG GACTACTTCC CGCTGCTGAA CGCCCGCCAG
TTCATGGAGG AGCAGCGGCG GCTTTCGTCC GACCGCTACC TTTTCGAAAA CGGGCTGCCT
CCTTATGGCA CGCGCGATCC CGGTAGTGTG ACGCCCTACA CGCCGCTCTT TACCGACCAA
GACATTCAGG CGGCCGGCGA AGGCACCGAC TGGATCGACC TGATTTCCGA AAACGGGCGC
ATTATCGAGC ACAACATCGC CGTGCGTGGA GGCTCGCCCG GTACGCAGTT CTACACGTCC
TTCAACGTGC AGCTCAACGA CGCCGTCCTG AAGAATTCCA CCTTCAATCG CTACAGCCTC
CGGGTGAACG TCGACCAGAC GATCTCTTCC CGCGTACGGC TCAAACTCCG CACGCAGGCC
ACGCGGCTGG AGGGCAACAA CGCCTCGACG GGCGCCAATG CCGGAGGGCC GGAGAAATTC
AACATGATTC AGAACGCCAT GACGTTCGCG CCCACGGTAC CCGTCTATGA CGAGAACGGC
AACTTTACGA AGTCCTACTA TCGCATTCAG ATGAACCCGG CCGCCTTTCT CATCATCGAC
GACGACAGCC GGGTAACCTC GCTGTTTGCT GCGCCCACGC TGGAGGTGGA TCTGACCGAT
CAGTTGCAGC TTACCGTCGT CGGTCAGGTT CAGGAGGAAA CCACGCTGCG TGGCTTCTAT
CTGCCGCGTC GGGCCGACCA CGACGTGTTG CCCGAGGGCA TGGCGCAGAA AAGCACGAAC
AGCGTCCAGA ACTACAGCGC CGAGTCGTAC CTGACCTACA CGGGACGGCT GGGCCCGGGC
GACCTGACGG CCGTCGCCGG CGCCGGCTAT TACCGTGGCG GGACGGAAGG CAGCTTCATG
CAGGGCGTGG GCTTTTTCAC GGACGCCTTC AGCTACCACA ACCTGGAGGT CAGCAGCGAT
CGGCTCCGCA ACATCGTGGA TTCCTGGAAA AGCTCGCGCA CGAAGCTCTC GCAGTTCGCC
CGCGTGAACT ATTCGCTCTA CGATCGCTAC GTGCTGACGC TGGTAGCCCG TCGCGACGGC
TCGAGCATTT TCTCCGAAAA CCATAAGTGG GGTTTCTTCC CGGGCATTTC GGCCGCCTGG
CTGATTTCGG AAGAGCCCTT CATGCAGAAC GTGAGCGGCC TGTCGCAGCT CAAGTTGCGC
GTCAGCTACG GCGAGGCCGG CAACGAAAGC GTGCTCAGCG GCAACACGCT GCAGCTCTAC
AGCGCCGGCT ATCCGTTCCT GATCGGCGCG ACCGAATACA ACGGCGTGGC CGTCTCGCAG
GTGGCCAACC CGAATCTGAA GTGGGAGACG GTCCAGACGT TCAATGTCGG GCTGGACTTC
GCCTTCTGGC AGTATCGGGT GCGGGGGTCG CTGGACTTCT TCGTAAAGAC GGCGCGGGAC
CTGCTGGACT TCAACCCATT GCCTGTGAAC AATCCGGTAG GGCGCGTGGC CGACAACGTG
GGCTCCACGC GCAGCCGGGG CTTCGAGCTG GCGCTGCACA CCGACAACCT GACGGGCTCT
CGCTTCCGCT GGAATACCGA CCTGACGCTC TCCTACTACA AGAGCTACTG GGTGGAGCGG
AACCCGCAGG TGCCGCTGCC ACCTTACGTG GGCGAGCACG ATCCGCTGGA CGTCATCTAC
GGCTGGGAGA CGGCCGGGAT CATTCGCAGC GAGGCGGATC GTCCCGACTA TATGCCCAAT
GCCAACCTGG GCAACCTGAT CTTCGTCGAC CAGAACGGCG ATGGCGTGCT GGATGCGCAG
GATGTGGTCA TCCTGGGGAA CACCACGCCG CGCTGGCAAC TGGGCCTGAA CAACACGATC
TCGATTGGAA ATTTCGATCT GAACGTGTTC GTCTACGGCT ACCTGGGCTT CAAGCGGTAC
AACAACTTCG CGCCCAATGT CGATGCGATC TCGCAGCTTA CCACGCCAAT GAACACGACG
ATCTACGCCC GGGAGATCTG GTCGACGGAC CGGCCGGACG GCACGCGGCC GGGGGTGGCG
GCCAACCCCT ACGCCACGAA CAACCCGACG GGCAATACGG ATTTCGACCT GCACGATGCC
AGTTTCCTCC GGCTGAGGAG CATTACGCTG GGCTACACGA TCCCCCGGCG CTGGCTGGGC
GGCGTGGCTT CGACCGTGCA GCGTGCCCGG CTGTTTGTGG ATCTGCAGAA TCTGGGCGTG
CTGACCGACT ATCCGGGGTT CGATCCGGAA TACACCGAGC CCAATCCCTA CCCCAAATAC
ACCACCGTGA CCGTCGGGGT GGAACTGGGA TTCTGA
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| Protein sequence | MGRQRLMERV RQAAVVARPG TIVLVLLGLL WLGNVGDVYA QVVVSGQVTS AEDGQPLPGV
NIVVKGTAIG TATDLDGRYS LAVPSPNDTL VFSFVGFETV SVPVAGRSVI DVQLQPAVIT
GEEVVVIGYG TVRQREVSGA VTTVSAEELN PLATLSVNQM VQGRVPGLSM QVRTTQPGGG
VSVNVRGAIS PRGNNTPLYV IDGVPITEYR QSDPGLYDRD LGFYGGVDRD PLAFLNPADI
ESITVLKDAA AAAIYGSAAA NGVVLITTKS GRAGAVRVDY RGSYSAQLMQ DYFPLLNARQ
FMEEQRRLSS DRYLFENGLP PYGTRDPGSV TPYTPLFTDQ DIQAAGEGTD WIDLISENGR
IIEHNIAVRG GSPGTQFYTS FNVQLNDAVL KNSTFNRYSL RVNVDQTISS RVRLKLRTQA
TRLEGNNAST GANAGGPEKF NMIQNAMTFA PTVPVYDENG NFTKSYYRIQ MNPAAFLIID
DDSRVTSLFA APTLEVDLTD QLQLTVVGQV QEETTLRGFY LPRRADHDVL PEGMAQKSTN
SVQNYSAESY LTYTGRLGPG DLTAVAGAGY YRGGTEGSFM QGVGFFTDAF SYHNLEVSSD
RLRNIVDSWK SSRTKLSQFA RVNYSLYDRY VLTLVARRDG SSIFSENHKW GFFPGISAAW
LISEEPFMQN VSGLSQLKLR VSYGEAGNES VLSGNTLQLY SAGYPFLIGA TEYNGVAVSQ
VANPNLKWET VQTFNVGLDF AFWQYRVRGS LDFFVKTARD LLDFNPLPVN NPVGRVADNV
GSTRSRGFEL ALHTDNLTGS RFRWNTDLTL SYYKSYWVER NPQVPLPPYV GEHDPLDVIY
GWETAGIIRS EADRPDYMPN ANLGNLIFVD QNGDGVLDAQ DVVILGNTTP RWQLGLNNTI
SIGNFDLNVF VYGYLGFKRY NNFAPNVDAI SQLTTPMNTT IYAREIWSTD RPDGTRPGVA
ANPYATNNPT GNTDFDLHDA SFLRLRSITL GYTIPRRWLG GVASTVQRAR LFVDLQNLGV
LTDYPGFDPE YTEPNPYPKY TTVTVGVELG F
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